Logo
Information on SUBCLASS 10.11.1
Subclass Accession number: 6577
Subclass: 10.11.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB

Conserved Annotation
GO : GO:0009374 (>50 %)  GO:0019842 (>75 %)  
SCOP : 50875 (>50 %)  50876 (>50 %)  50877 (>50 %)  
Number of loops: 3

Average sequence ID (%) : 40.7 +/- 34.2
Average RMSD (Å) : 1.133 +/- 0.493

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XhXpXXXXpGScXh
(φψ)-conformation: bbpabppaalppbb
Pattern: xxxxxxxxxxxxxxxxxx
Conservation:0.131-0.513-0.084-1.588-0.5130.131-0.298-0.7280.131-0.0843.1391.420-0.513-0.084-0.7280.561-0.5130.131
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1luq_A_10541luq   A10581075GRYDSAPATDGSGTALGWEEE-SS---SS--EEEEEebbxabwxaavxxbxbbb
1r5l_A_1011r5l   A101118HGVLRSRDPTGSKVLIYREEE-SS--TT--EEEEEEbbbxabxxaavxxbbbbb
1rxj_A_541rxj   A5875GRYDSAPATDGSGTALGWEEE-SS--SSS--EEEEEebbxabxpaavxxbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1luq_A_10541luq   A     BTNBIOTIN W - 1079
1luq_A_10541luq   A     GOLGLYCEROL K - 1080
1r5l_A_1011r5l   A     MSESELENOMETHIONINE H - 101
1r5l_A_1011r5l   A     MSESELENOMETHIONINE G - 102
1r5l_A_1011r5l   A     MSESELENOMETHIONINE L - 104
1r5l_A_1011r5l   A     VIV(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL L - 115
1r5l_A_1011r5l   A     MSESELENOMETHIONINE I - 116
1r5l_A_1011r5l   A     VIV(2R)-2,5,7,8-TETRAMETHYL-2-[(4R,8R)-4,8,12-TRIMETHYLTRIDECYL]CHROMAN-6-OL Y - 117
1r5l_A_1011r5l   A     MSESELENOMETHIONINE R - 118
1rxj_A_541rxj   A     BNI5-(2-OXO-HEXAHYDRO-THIENO[3,4-D]IMIDAZOL-6-YL)-PENTANOIC ACID (4-NITRO-PHENYL)-AMIDE W - 79

Clusters included in this Subclass
CLUSTER: HA.9.59