Information on SUBCLASS 11.6.1 |
Subclass Accession number: 6587
Subclass: 11.6.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>50 %) 3.4.21 (>50 %) GO : GO:0004175 (>75 %) GO:0004252 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) GO:0042708 (>50 %) SCOP : 50493 (>75 %) 50494 (>75 %) 50514 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 66.7 +/- -18.1 Average RMSD (Å) : 0.333 +/- 0.058 Consensus geometry
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Consensus Sequence: | FhSXhGCNXXpKPpV |
(φψ)-conformation: | bbpaaeabbplbppb |
Pattern: | [WY] | [AQ] | [V] | [H] | [G] | [IV] | [TV] | [S] | [F] | [GV] | [S] | [ARS] | [FL] | [G] | [C] | [N] | [TVY] | [ITY] | [HKR] | [K] | [P] | [ST] | [V] | [F] | [T] | [R] |
Conservation: | 0.736 | -1.053 | -0.108 | 1.684 | 0.788 | -0.328 | -0.849 | -0.108 | 0.788 | -1.479 | -0.108 | -1.352 | -0.823 | 0.788 | 2.131 | 0.788 | -1.401 | -1.501 | -0.904 | 0.340 | 1.236 | -0.628 | -0.108 | 0.788 | 0.340 | 0.340 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1bru_P_207 | 1bru | P | 207 | 232 | WQVHGIVSFGSSLGCNYYHKPSVFTR | EEEEEEEEE-BTTBSS-TT--EEEEE | xbxabbxabbxaaeabbxvbwpbbxx |
1gvk_B_206 | 1gvk | B | 207 | 232 | YAVHGVTSFVSRLGCNVTRKPTVFTR | EEEEEEEEE-BTTBSS-TT--EEEEE | xbxabbpabbxaaeaxbxvbpxbbxx |
1pyt_C_607 | 1pyt | C | 607 | 632 | WQVHGVTSFVSAFGCNTIKKPTVFTR | EEEEEEEEE-BTTBSS-TT--EEEEE | bbxabbpabbxaaeabbxvbxpxbxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bru_P_207 | 1bru | P | 1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL | V - 213 |
1bru_P_207 | 1bru | P | 1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL | S - 214 |
1bru_P_207 | 1bru | P | 1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL | F - 215 |
1bru_P_207 | 1bru | P | 1NB2-(2-HYDROXY-CYCLOPENTYL)-PENT-4-ENAL | G - 216 |
Clusters included in this Subclass |
CLUSTER: HA.11.29 |