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Information on SUBCLASS 14.2.1
Subclass Accession number: 6604
Subclass: 14.2.1 PSSM
Type: HA beta-beta hairpin
DB: ArchDB95

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 36.4 +/- 25.2
Average RMSD (Å) : 0.371 +/- 0.111

Consensus geometry
d (Å): 5 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hhGhhhDhppXhRphXph
(φψ)-conformation: bbelgpbbllblaapabb
Pattern: [ILV][IV][G][CFY][ACGS][FILY][D][fy][adn][DEGNQ]x[FRY][R][degn][FLW][adnp][dhy][CILV][ACFGV][iklv]
Conservation:0.3810.7282.1160.515-0.431-0.2802.1160.129-0.396-0.530-1.2490.1191.561-0.539-0.270-1.058-0.450-0.158-1.235-1.068
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bzy_A_1871bzy   A187206VVGYALDYNEYFRDLNHVCVEEBTTB-BTTBSSS-SSEEExbelvxbblvxvaxbaxxbb
1cjb_A_1981cjb   A198217VVGYSLDYNEIFRDLDHCCLEEBTTB-BTTBSTT-SSEEEbbelvxbblvbvaaxabxbb
1dqn_A_1811dqn   A181200LIGFGLDDNGLRRGWAHLFDEEBTTB-BTTB-TT--SEEExbelgxxblvblaaxaxxbb
1fsg_A_2001fsg   A200219IVGCCYDFNEMFRDFDHVAVEEBTTB-BTTBSTT-SSEEExbelvxbblvxvaaxabxbx
1hgx_A_1571hgx   A157176IIGYGFDFHNKYRNLPVIGIEEBTTB-BTTBSTT-SSEEExbelgxbblvbvaapabbbx
1j7j_A_1531j7j   A153172VVGYGIDYAQRYRHLPYVGKEEBTTB-SSS-STT-SSEEEbbelgxbbvlbvaaxabxbb
1tc1_A_1641tc1   A165184VIGYGLDYDDTYRELRDIVVEEBTTB-BTTBSTT-SSEEEbbelgxbblvbvaaxabxbx
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER V - 187
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER V - 188
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER G - 189
1bzy_A_1871bzy   A     POPPYROPHOSPHATE 2- A - 191
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER L - 192
1bzy_A_1871bzy   A     POPPYROPHOSPHATE 2- L - 192
1bzy_A_1871bzy   A     MGMAGNESIUM ION L - 192
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER D - 193
1bzy_A_1871bzy   A     POPPYROPHOSPHATE 2- D - 193
1bzy_A_1871bzy   A     MGMAGNESIUM ION D - 193
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER Y - 194
1bzy_A_1871bzy   A     MGMAGNESIUM ION Y - 194
1bzy_A_1871bzy   A     MGMAGNESIUM ION N - 195
1bzy_A_1871bzy   A     POPPYROPHOSPHATE 2- E - 196
1bzy_A_1871bzy   A     MGMAGNESIUM ION E - 196
1bzy_A_1871bzy   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER R - 199
1bzy_A_1871bzy   A     POPPYROPHOSPHATE 2- R - 199
1bzy_A_1871bzy   A     MGMAGNESIUM ION R - 199
1cjb_A_1981cjb   A     IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE V - 198
1cjb_A_1981cjb   A     IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE V - 199
1cjb_A_1981cjb   A     POPPYROPHOSPHATE 2- S - 202
1cjb_A_1981cjb   A     MGMAGNESIUM ION L - 203
1cjb_A_1981cjb   A     IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE L - 203
1cjb_A_1981cjb   A     MGMAGNESIUM ION D - 204
1cjb_A_1981cjb   A     IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE D - 204
1cjb_A_1981cjb   A     POPPYROPHOSPHATE 2- D - 204
1cjb_A_1981cjb   A     MGMAGNESIUM ION Y - 205
1cjb_A_1981cjb   A     IRP(1S)-1(9-DEAZAHYPOXANTHIN-9YL)1,4-DIDEOXY-1,4-IMINO-D-RIBITOL-5-PHOSPHATE Y - 205
1cjb_A_1981cjb   A     MGMAGNESIUM ION N - 206
1cjb_A_1981cjb   A     MGMAGNESIUM ION E - 207
1cjb_A_1981cjb   A     POPPYROPHOSPHATE 2- E - 207
1cjb_A_1981cjb   A     MGMAGNESIUM ION R - 210
1cjb_A_1981cjb   A     POPPYROPHOSPHATE 2- R - 210
1dqn_A_1811dqn   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER L - 181
1dqn_A_1811dqn   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER I - 182
1dqn_A_1811dqn   A     POPPYROPHOSPHATE 2- G - 185
1dqn_A_1811dqn   A     MGMAGNESIUM ION L - 186
1dqn_A_1811dqn   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER L - 186
1dqn_A_1811dqn   A     POPPYROPHOSPHATE 2- L - 186
1dqn_A_1811dqn   A     MGMAGNESIUM ION D - 187
1dqn_A_1811dqn   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER D - 187
1dqn_A_1811dqn   A     POPPYROPHOSPHATE 2- D - 187
1dqn_A_1811dqn   A     IMUPHOSPHORIC ACID MONO-[5-(2-AMINO-4-OXO-4,5-DIHYDRO-3H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-3,4-DIHYDROXY-PYRROLIDIN -2-YLMETHYL] ESTER D - 188
1dqn_A_1811dqn   A     MGMAGNESIUM ION R - 193
1dqn_A_1811dqn   A     POPPYROPHOSPHATE 2- R - 193
1fsg_A_2001fsg   A     9DG9-DEAZAGUANINE I - 200
1fsg_A_2001fsg   A     9DG9-DEAZAGUANINE V - 201
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED C - 204
1fsg_A_2001fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID C - 204
1fsg_A_2001fsg   A     9DG9-DEAZAGUANINE C - 204
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED Y - 205
1fsg_A_2001fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID Y - 205
1fsg_A_2001fsg   A     9DG9-DEAZAGUANINE Y - 205
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED D - 206
1fsg_A_2001fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID D - 206
1fsg_A_2001fsg   A     9DG9-DEAZAGUANINE D - 206
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED F - 207
1fsg_A_2001fsg   A     9DG9-DEAZAGUANINE F - 207
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED N - 208
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED E - 209
1fsg_A_2001fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID E - 209
1fsg_A_2001fsg   A     MO3MAGNESIUM ION, 3 WATERS COORDINATED R - 212
1fsg_A_2001fsg   A     PRPALPHA-PHOSPHORIBOSYLPYROPHOSPHORIC ACID R - 212
1hgx_A_1571hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE I - 157
1hgx_A_1571hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE I - 158
1hgx_A_1571hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE G - 161
1hgx_A_1571hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE F - 162
1hgx_A_1571hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE D - 163
1hgx_A_1571hgx   A     5GPGUANOSINE-5'-MONOPHOSPHATE F - 164
1tc1_A_1641tc1   A     FMBFORMYCIN B F - 164
1tc1_A_1641tc1   A     FMBFORMYCIN B V - 165
1tc1_A_1641tc1   A     FMBFORMYCIN B I - 166
1tc1_A_1641tc1   A     FMBFORMYCIN B L - 170
1tc1_A_1641tc1   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID L - 170
1tc1_A_1641tc1   A     FMBFORMYCIN B D - 171
1tc1_A_1641tc1   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID D - 171
1tc1_A_1641tc1   A     FMBFORMYCIN B Y - 172
1tc1_A_1641tc1   A     MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID R - 177

Clusters included in this Subclass
CLUSTER: HA.14.2