Information on SUBCLASS 15.3.1 |
Subclass Accession number: 6613
Subclass: 15.3.1 Type: HA beta-beta hairpin DB: ArchDB95 Image coordinates: Consensus coordinates: Conserved Annotation EC : 3.4 (>75 %) 3.4.21 (>50 %) 3.4.21 (>75 %) 3.4.21.4 GO : GO:0004175 (>75 %) GO:0004252 (>75 %) GO:0005509 (>75 %) GO:0008233 (>75 %) GO:0008236 (>75 %) SCOP : 50493 (>75 %) 50493 (>75 %) 50494 (>75 %) 50494 (>75 %) 50514 (>75 %) 50514 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 82.7 +/- -51.5 Average RMSD (Å) : 0.267 +/- 0.058 Consensus geometry
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Consensus Sequence: | SGWGNTXSSGXpYPDXLpC |
(φψ)-conformation: | beappababebbppappbb |
Pattern: | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x | x |
Conservation: | -0.810 | 1.714 | -0.390 | -0.390 | -0.390 | 0.452 | 2.556 | 0.452 | 0.452 | 0.031 | -1.336 | -0.390 | -0.390 | 0.452 | -1.126 | -1.021 | 0.873 | 0.873 | 0.452 | -1.547 | -0.390 | -0.810 | 1.714 | -0.390 | -1.126 | -0.390 | 0.873 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fxy_A_135 | 1fxy | A | 135 | 161 | KCLISGWGNTASSGADYPDELQCLDAP | EEEEEESS---SSS----SS-EEEEEE | xbbbbeaxpababebbxxabpxbbbbx |
1hj9_A_135 | 1hj9 | A | 135 | 161 | QCLISGWGNTKSSGTSYPDVLKCLKAP | EEEEEESS---SSS----SS-EEEEEE | xbbbbeaxpababebbbxaxxbbbxbx |
1trn_A_135 | 1trn | A | 135 | 161 | KCLISGWGNTASSGADYPDELQCLDAP | EEEEEES---SSSS----SB-EEEEEE | xbbbbeaxxababexbxxaxpxbbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1trn_A_135 | 1trn | A | PO4PHOSPHATE ION | N - 143 |
1trn_A_135 | 1trn | A | PO4PHOSPHATE ION | A - 149 |
1trn_A_135 | 1trn | A | PO4PHOSPHATE ION | Y - 151 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1hj9_A_135 | 1hj9 | A | S41SO4 BINDING SITE FOR RESIDUE A247 | S - 146 |
1hj9_A_135 | 1hj9 | A | S41SO4 BINDING SITE FOR RESIDUE A247 | S - 147 |
1hj9_A_135 | 1hj9 | A | S41SO4 BINDING SITE FOR RESIDUE A247 | G - 148 |
Clusters included in this Subclass |
CLUSTER: HA.14.12 |