Information on SUBCLASS 4.8.3 |
Subclass Accession number: 662
Subclass: 4.8.3 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.8 (>75 %) 1.8.1 (>75 %) 3.4 (>50 %) 3.4.23 (>50 %) GO : GO:0004175 (>50 %) GO:0004190 (>50 %) GO:0005489 (>75 %) GO:0008233 (>50 %) GO:0015036 (>75 %) GO:0016667 (>75 %) GO:0016668 (>75 %) GO:0048037 (>75 %) GO:0050660 (>75 %) GO:0050662 (>75 %) SCOP : 50629 (>50 %) 50630 (>50 %) 50646 (>50 %) 55423 (>75 %) 55424 (>75 %) 55425 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 22.8 +/- 21.0 Average RMSD (Å) : 0.400 +/- 0.173 Consensus geometry
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Consensus Sequence: | XVGpppXX |
(φψ)-conformation: | bbeaalpp |
Pattern: | [AFY] | [AVY] | [AGI] | [DQ] | [AFI] | x | [V] | [G] | [DES] | [HN] | [QR] | [AQ] | [KPQ] | x | [ST] | [FV] | x | [ILV] | x |
Conservation: | -0.320 | -0.778 | -1.159 | 0.604 | -0.854 | -0.930 | 1.281 | 2.654 | -0.015 | 1.233 | 0.669 | -0.082 | -0.320 | -1.235 | 0.567 | -0.108 | -0.778 | 0.366 | -0.796 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1j71_A_14 | 1j71 | A | 14 | 32 | YAADIVVGSNQQKQTVVID | EEEEEEETTTTEEEEEEEE | bbbxbbbeaalxxbbbxxb |
1lf2_A_15 | 1lf2 | A | 16 | 34 | FYGDAEVGDNQQPFTFILD | EEEEEEETTTTEEEEEEEE | bbbxbbbeaalxwbbbxxb |
1oa8_A_627 | 1oa8 | A | 628 | 646 | AVIQFAVGEHRAQVSVEVL | EEEEEEETTTTEEEEEEEE | bbbxbbxeaalxxbbbxbp |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.3.149 |