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Information on SUBCLASS 2.5.1
Subclass Accession number: 6669
Subclass: 2.5.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 18.9 +/- 19.3
Average RMSD (Å) : 0.850 +/- 0.172

Consensus geometry
d (Å): 9 delta (°): 0-45 theta (°): 45-90 rho (°): 135-180
Consensus Sequence: XXXGXX
(φψ)-conformation: bbaebb
Pattern: xxxx[G]x[chnqrst]x
Conservation:-0.281-0.408-0.419-0.2432.260-0.435-0.474-1.000
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1d3c_A_5761d3c   A580587EVLSGDQVEE-SSSEEbxxaepbb
1d9e_A_11631d9e   A11651171LCDRGAN.EEE--EE.bbxaebp.
1euh_A_1351euh   A141148REPVGLVLEEE-SEEExbxaexbx
1fxp_A_11491fxp   A11511157LTERGTT.EEE--EE.bbxaebp.
1lqt_A_3171lqt   A319325VRSVGYR.EE-S-EE.bxbaexb.
1ntg_A_761ntg   A7682VESQGML.EEE--EE.xxxaebx.
1o04_A_1501o04   A156163HEPVGVCGEEE--EEExbxaexbx
1o60_A_1631o60   A165171LCDRGTN.EEE--EE.bbxaebp.
1o94_A_6371o94   A639646VLVTGRHSEEES-EEExxbaebbx
1rne_*_1911rne   -192199IQMKGVSVEEE--EEEbxbaebbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1d3c_A_5761d3c   A     CACALCIUM ION Y - 576
1d3c_A_5761d3c   A     CACALCIUM ION D - 577
1d3c_A_5761d3c   A     CACALCIUM ION N - 578
1fxp_A_11491fxp   A     PO4PHOSPHATE ION R - 1154
1lqt_A_3171lqt   A     ACTACETATE ION R - 320
1lqt_A_3171lqt   A     ODP4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE S - 321
1lqt_A_3171lqt   A     ACTACETATE ION V - 322
1lqt_A_3171lqt   A     ODP4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE V - 322
1lqt_A_3171lqt   A     ODP4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE G - 323
1lqt_A_3171lqt   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 324
1lqt_A_3171lqt   A     ODP4-OXO-NICOTINAMIDE-ADENINE DINUCLEOTIDE PHOSPHATE Y - 324
1o04_A_1501o04   A     GAIGUANIDINE F - 150
1o04_A_1501o04   A     EDO1,2-ETHANEDIOL F - 151
1o04_A_1501o04   A     EDO1,2-ETHANEDIOL Y - 153
1o04_A_1501o04   A     EDO1,2-ETHANEDIOL R - 155
1o04_A_1501o04   A     GAIGUANIDINE E - 157
1o04_A_1501o04   A     GAIGUANIDINE P - 158
1o04_A_1501o04   A     GAIGUANIDINE V - 159
1o04_A_1501o04   A     GAIGUANIDINE G - 160
1o04_A_1501o04   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 165
1o60_A_1631o60   A     MSESELENOMETHIONINE I - 164
1o60_A_1631o60   A     MSESELENOMETHIONINE L - 165
1o60_A_1631o60   A     MSESELENOMETHIONINE C - 166
1o60_A_1631o60   A     MSESELENOMETHIONINE D - 167
1o94_A_6371o94   A     ADPADENOSINE-5'-DIPHOSPHATE R - 644

Clusters included in this Subclass
CLUSTER: AR.2.25
CLUSTER: AR.3.82