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Information on SUBCLASS 3.4.3
Subclass Accession number: 6709
Subclass: 3.4.3 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 12

Average sequence ID (%) : 11.0 +/- 14.9
Average RMSD (Å) : 0.542 +/- 0.138

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 90-135 rho (°): 135-180
Consensus Sequence: XhXXXXX
(φψ)-conformation: bbpplbb
Pattern: x[agilpv]x[adegnpt][dgnqrs][acdstv]x[hilv]
Conservation:-0.5210.044-1.4210.0110.920-0.235-0.6411.843
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b12_A_1421b12   A148155VGLPGDKVEE-TT-EEabbpvxbb
1bag_*_4091bag   -413420TINARSVAEE-TTEEEbxxplbbb
1cb8_A_5091cb8   A513520KAQGQFWLEE-TTEEExxxpvxbb
1g38_A_3561g38   A359366LPKEGVRLEE-TTEEEbxxpvxbb
1g71_A_2901g71   A291298LRLPSTLHEE-TTSEEbpxpvxxx
1kgq_A_1391kgq   A139146MVDTWATVEE-TTEEEbbxpvxbb
1kgq_A_2261kgq   A226233RVPAGSVVEE-TTEEEbbppvxbb
1l6p_A_281l6p   A3441QIKDGYYLEE-TTEEExbppvbbx
1liu_A_1751liu   A176183ELVKGSQVEE-TT-EEbxxpgxxb
1ogo_X_2671ogo   X269276YLAPGAYVEE-TTEEEbbxpvxbb
1qre_A_1201qre   A126133AVGDDTFIEE-TT-EEbbxplbxb
1qre_A_1381qre   A143150KVGNNCVLEE-TT-EEbxxxlbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1b12_A_1421b12   A     1PN(5S,6S)-6-[(R)ACETOXYETH-2-YL]-PENEM-3-CARBOXYLATEPROPANE D - 142
1b12_A_1421b12   A     1PN(5S,6S)-6-[(R)ACETOXYETH-2-YL]-PENEM-3-CARBOXYLATEPROPANE Y - 143
1b12_A_1421b12   A     1PN(5S,6S)-6-[(R)ACETOXYETH-2-YL]-PENEM-3-CARBOXYLATEPROPANE I - 144
1b12_A_1421b12   A     1PN(5S,6S)-6-[(R)ACETOXYETH-2-YL]-PENEM-3-CARBOXYLATEPROPANE K - 145
1kgq_A_1391kgq   A     NPI2-AMINOPIMELIC ACID M - 139
1kgq_A_1391kgq   A     NPI2-AMINOPIMELIC ACID D - 141
1kgq_A_1391kgq   A     SCOSUCCINAMIDE-COA D - 141
1kgq_A_1391kgq   A     NPI2-AMINOPIMELIC ACID T - 142
1kgq_A_1391kgq   A     SCOSUCCINAMIDE-COA T - 142
1kgq_A_2261kgq   A     SCOSUCCINAMIDE-COA V - 232
1kgq_A_2261kgq   A     SCOSUCCINAMIDE-COA V - 233
1kgq_A_2261kgq   A     SCOSUCCINAMIDE-COA V - 234
1kgq_A_2261kgq   A     SCOSUCCINAMIDE-COA S - 235
1qre_A_1201qre   A     OCNCOBALT ION, 2 WATERS COORDINATED Q - 120
1qre_A_1201qre   A     BCTBICARBONATE ION H - 122
1qre_A_1201qre   A     OCNCOBALT ION, 2 WATERS COORDINATED H - 122
1qre_A_1201qre   A     OCNCOBALT ION, 2 WATERS COORDINATED G - 123

Clusters included in this Subclass
CLUSTER: AR.4.14
CLUSTER: AR.5.82