Information on SUBCLASS 4.2.3 |
Subclass Accession number: 6754
Subclass: 4.2.3 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 31.4 +/- 17.3 Average RMSD (Å) : 0.500 +/- 0.173 Consensus geometry
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Consensus Sequence: | hhhppXGX |
(φψ)-conformation: | bbpabpeb |
Pattern: | x | [RT] | [L] | [EH] | [LM] | [FIW] | [AP] | [DNR] | [ET] | [EP] | [G] | [IT] | [FWY] | x | [GLV] | x | [C] |
Conservation: | -0.975 | -0.298 | 0.530 | 0.481 | 0.276 | -0.423 | -0.020 | -0.524 | -0.298 | 0.111 | 1.434 | -0.335 | 0.530 | -1.076 | -1.176 | -1.025 | 2.789 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1cyx_*_191 | 1cyx | - | 191 | 207 | TRLHLIANEPGTYDGIC | EEEEE--SSSEEEEEEE | bbbbbbxabxexbxbbb |
1kcw_*_1004 | 1kcw | - | 1005 | 1021 | QTLEMFPRTPGIWLLHC | EEEEE---S-EEEEEEE | bbbxbbwaxxexbxbbx |
1kcw_*_663 | 1kcw | - | 664 | 680 | LTLHMWPDTEGTFNVEC | EEEEE---S-EEEEEEE | bbxbbbpabxebbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1cyx_*_191 | 1cyx | * | CUADINUCLEAR COPPER ION | C - 207 |
1kcw_*_663 | 1kcw | * | CUCOPPER (II) ION | C - 680 |
1kcw_*_1004 | 1kcw | * | OOXYGEN ATOM | I - 1016 |
1kcw_*_1004 | 1kcw | * | NAGN-ACETYL-D-GLUCOSAMINE | I - 1016 |
1kcw_*_1004 | 1kcw | * | CUCOPPER (II) ION | L - 1018 |
1kcw_*_1004 | 1kcw | * | CUCOPPER (II) ION | H - 1020 |
1kcw_*_1004 | 1kcw | * | OOXYGEN ATOM | H - 1020 |
1kcw_*_1004 | 1kcw | * | CUCOPPER (II) ION | C - 1021 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1kcw_*_663 | 1kcw | * | CU2TYPE I CU BINDING SITE IN DOMAIN 4. | C - 680 |
1kcw_*_1004 | 1kcw | * | CU4TYPE I CU BINDING SITE IN DOMAIN 6. | C - 1021 |
Clusters included in this Subclass |
CLUSTER: AR.5.115 |