Information on SUBCLASS 4.2.5 |
Subclass Accession number: 6756
Subclass: 4.2.5 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 2 Average sequence ID (%) : 0.0 +/- 0.0 Average RMSD (Å) : 0.700 +/- 0.000 Consensus geometry
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Consensus Sequence: | hphphhhX |
(φψ)-conformation: | bppabpbb |
Pattern: | [AI] | [DP] | [IL] | [GS] | [CF] | [QT] | [FY] | [KS] | [FM] | [PY] | [AP] | x | x |
Conservation: | -1.222 | 0.274 | 0.573 | -0.025 | 0.274 | -0.623 | 2.667 | -0.324 | 0.274 | -0.623 | -0.324 | -0.922 | -1.000 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ig8_A_151 | 1ig8 | A | 151 | 162 | IPLGFTFSFPAS. | EEEEEE--SSEE. | bxbbbxbabxbb. |
1phm_*_221 | 1phm | - | 223 | 235 | ADISCQYKMYPMH | EEEEEE--SS-EE | bbbbbxxabxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1phm_*_221 | 1phm | * | GOLGLYCEROL | C - 227 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | Q - 228 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | Y - 229 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | K - 230 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | M - 231 |
1phm_*_221 | 1phm | * | CUCOPPER (II) ION | H - 235 |
1phm_*_221 | 1phm | * | AZIAZIDE ION | H - 235 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | H - 235 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | F - 237 |
1phm_*_221 | 1phm | * | GOLGLYCEROL | A - 238 |
1phm_*_221 | 1phm | * | CUCOPPER (II) ION | H - 242 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1phm_*_221 | 1phm | * | CUBACTIVE SITE RESIDUES R240,Y318,N316 HYDROGEN BOND TO PEPTIDYLGLYCINE SUBSTRATE. | R - 240 |
Clusters included in this Subclass |
CLUSTER: AR.4.104 |