Information on SUBCLASS 4.12.1 |
Subclass Accession number: 6779
Subclass: 4.12.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 37.1 +/- 25.0 Average RMSD (Å) : 0.357 +/- 0.079 Consensus geometry
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Consensus Sequence: | hXchphhQ |
(φψ)-conformation: | bblaapbb |
Pattern: | [LMTV] | [AGKQRT] | [DN] | [ILM] | [DEQ] | [AFMWY] | [ivw] | [Q] | [AFY] | [h] |
Conservation: | -0.509 | -1.215 | 0.865 | 0.272 | 0.323 | -0.648 | -1.253 | 1.634 | -0.612 | 1.142 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1chu_A_235 | 1chu | A | 235 | 244 | VANLEFNQFH | EE-TT-EEEE | bblaabbxbx |
1d4d_A_355 | 1d4d | A | 355 | 364 | TRDLQYIQAH | EE-TT-EEEE | bblaaxbxbx |
1e39_A_356 | 1e39 | A | 356 | 365 | LKDMQYIQAA | EE-TT-EEEE | bblaaxbxxx |
1kf6_A_223 | 1kf6 | A | 223 | 232 | LRDMEFVQYH | EESTT-EEEE | bxlaaxbxbx |
1nek_A_233 | 1nek | A | 233 | 242 | VQDMEMWQFH | EESTT-EEEE | bxlaaxbxxx |
1qla_A_248 | 1qla | A | 248 | 257 | LGNMEAVQFH | EE-TT-EEEE | bblaaxbbbb |
1qo8_A_351 | 1qo8 | A | 351 | 360 | MTDIDWVQAH | EESTT-EEEE | bblaaxbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1d4d_A_355 | 1d4d | A | SINSUCCINIC ACID | Q - 362 |
1d4d_A_355 | 1d4d | A | SINSUCCINIC ACID | H - 364 |
1d4d_A_355 | 1d4d | A | SINSUCCINIC ACID | T - 366 |
1e39_A_356 | 1e39 | A | FUMFUMARIC ACID | Q - 363 |
1e39_A_356 | 1e39 | A | FUMFUMARIC ACID | A - 365 |
1e39_A_356 | 1e39 | A | FUMFUMARIC ACID | T - 367 |
1kf6_A_223 | 1kf6 | A | OAAOXALOACETATE ION | Q - 230 |
1kf6_A_223 | 1kf6 | A | OAAOXALOACETATE ION | H - 232 |
1nek_A_233 | 1nek | A | OAAOXALOACETATE ION | Q - 240 |
1nek_A_233 | 1nek | A | OAAOXALOACETATE ION | H - 242 |
1nek_A_233 | 1nek | A | OAAOXALOACETATE ION | T - 244 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e39_A_356 | 1e39 | A | SBSSUBSTRATE BINDING SITE, HIS365ALA ENGINEERED MUTATION | A - 365 |
Clusters included in this Subclass |
CLUSTER: AR.3.50 |