Information on SUBCLASS 5.1.2 |
Subclass Accession number: 6802
Subclass: 5.1.2 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 9.3 +/- 20.0 Average RMSD (Å) : 0.883 +/- 0.376 Consensus geometry
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Consensus Sequence: | XhphpXhhh |
(φψ)-conformation: | bppaaapbb |
Pattern: | x | x | x | [DNPR] | [ap] | [ADENR] | x | [AIMTV] | [glv] | [lpwy] |
Conservation: | -1.000 | -0.462 | -1.006 | 0.761 | 1.591 | 0.363 | -0.074 | 1.010 | -0.843 | -1.340 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c8k_A_191 | 1c8k | A | 191 | 199 | .KARPEFTLP | .EE-GGG-EE | .bxbaaaxbx |
1gd0_A_94 | 1gd0 | A | 99 | 108 | YDMNAANVGW | EE--GGG-EE | bxxxaaabxb |
1gp6_A_298 | 1gp6 | A | 305 | 314 | CEPPKDKIVL | EE--TTT-EE | xbxxaaabxx |
1itv_A_129 | 1itv | A | 129 | 137 | .MVDPRSASE | .EE-GGG-EE | .bbxaaapbx |
1l5r_A_191 | 1l5r | A | 191 | 199 | .KSRPEFMLP | .EE-GGG-EE | .bpbaaaxbw |
1svb_*_126 | 1svb | - | 130 | 139 | HVYDANKIVY | EE--TTT-EE | bbxbaaaxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gd0_A_94 | 1gd0 | A | CITCITRIC ACID | N - 97 |
1gd0_A_94 | 1gd0 | A | CITCITRIC ACID | Y - 99 |
1gp6_A_298 | 1gp6 | A | SINSUCCINIC ACID | R - 298 |
1gp6_A_298 | 1gp6 | A | SINSUCCINIC ACID | I - 299 |
1gp6_A_298 | 1gp6 | A | SINSUCCINIC ACID | S - 300 |
1gp6_A_298 | 1gp6 | A | SINSUCCINIC ACID | A - 302 |
1gp6_A_298 | 1gp6 | A | SINSUCCINIC ACID | F - 304 |
1gp6_A_298 | 1gp6 | A | QUE3,5,7,3',4'-PENTAHYDROXYFLAVONE | F - 304 |
1gp6_A_298 | 1gp6 | A | FE2FE (II) ION | F - 304 |
1gp6_A_298 | 1gp6 | A | QUE3,5,7,3',4'-PENTAHYDROXYFLAVONE | C - 305 |
1gp6_A_298 | 1gp6 | A | QUE3,5,7,3',4'-PENTAHYDROXYFLAVONE | E - 306 |
1gp6_A_298 | 1gp6 | A | DH2(2S,3S)-2-(3,4-DIHYDROXYPHENYL)-3,5,7-TRIHYDROXY-2,3-DIHYDRO-4H-CHROMEN-4-ONE | E - 306 |
1l5r_A_191 | 1l5r | A | 700[5-CHLORO-1H-INDOL-2-CARBONYL-PHENYLALANINYL]-AZETIDINE-3-CARBOXYLIC ACID | K - 191 |
1l5r_A_191 | 1l5r | A | 700[5-CHLORO-1H-INDOL-2-CARBONYL-PHENYLALANINYL]-AZETIDINE-3-CARBOXYLIC ACID | S - 192 |
1l5r_A_191 | 1l5r | A | 700[5-CHLORO-1H-INDOL-2-CARBONYL-PHENYLALANINYL]-AZETIDINE-3-CARBOXYLIC ACID | P - 194 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1gp6_A_298 | 1gp6 | A | SINSIN BINDING SITE | R - 298 |
1gp6_A_298 | 1gp6 | A | SINSIN BINDING SITE | S - 300 |
1gp6_A_298 | 1gp6 | A | QUEQUE BINDING SITE | F - 304 |
1gp6_A_298 | 1gp6 | A | DH2DH2 BINDING SITE | E - 306 |
Clusters included in this Subclass |
CLUSTER: AR.5.39 |
CLUSTER: AR.6.65 |