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Information on SUBCLASS 6.2.1
Subclass Accession number: 6838
Subclass: 6.2.1 PSSM
Type: AR beta-beta link
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 30.6 +/- 27.4
Average RMSD (Å) : 0.440 +/- 0.134

Consensus geometry
d (Å): 9 delta (°): 90-135 theta (°): 90-135 rho (°): 315-360
Consensus Sequence: hXXXhXpGXX
(φψ)-conformation: pbaapppgbb
Pattern: [KQS][ILT][FIL][ATV]x[AV]x[PV][STV][AD][AENR][FIPV]x[KPR][G]x[ITV][FQRY]
Conservation:0.3020.0080.373-0.047-0.7350.305-0.8850.101-0.2100.639-0.727-0.841-0.9340.3533.399-0.7790.310-0.633
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1aa6_*_6331aa6   -634651KIITRAQVSDRPNKGAIYEEEEEEEEESSS-TTEEEbbbbxxbxbaaxxpgbbb
1dmr_*_6951dmr   -695712QILTGVKVTDAVMKGVIQEEEEEEEE-TTB-TTEEEbbbbbxbxbaaxxpvbbb
1eu1_A_6951eu1   A695712QILVGAKVSDAVMPGAIQEEEEEEEE-TTB-TTEEEbbxbbxbxbaaxxpvbbb
1g8k_A_7541g8k   A754771STFAMVYPVAEIKRGQTFEEEEEEEE-TTS-TTEEEbbbbxxbwbaaxxpvbbb
1tmo_*_7041tmo   -704721QLLAGAVVSDNFPKGIVREEEEEEEE-TTS-TTEEEbbbbbxbxbaabxpvbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1aa6_*_6331aa6   *     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Y - 651
1dmr_*_6951dmr   *     PGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Q - 712
1dmr_*_6951dmr   *     OOXYGEN ATOM Q - 712
1eu1_A_6951eu1   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE Q - 712
1g8k_A_7541g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED S - 754
1g8k_A_7541g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED T - 755
1g8k_A_7541g8k   A     OC2CALCIUM ION, 2 WATERS COORDINATED F - 756
1g8k_A_7541g8k   A     HGMERCURY (II) ION P - 761
1g8k_A_7541g8k   A     OC6CALCIUM ION, 6 WATERS COORDINATED E - 764
1g8k_A_7541g8k   A     MGD2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE F - 771
1tmo_*_7041tmo   *     2MDGUANYLATE-O'-PHOSPHORIC ACID MONO-(2-AMINO-5,6-DIMERCAPTO-4-OXO-3,5,6,7,8A,9,10,10A-OCTAHYDRO-4H-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-7-YLMETHYL) ESTER R - 721

Clusters included in this Subclass
CLUSTER: AR.6.15