Information on SUBCLASS 1.1.8 |
Subclass Accession number: 69
Subclass: 1.1.8 Type: HE alpha-beta DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 25 Average sequence ID (%) : 16.4 +/- 17.0 Average RMSD (Å) : 0.440 +/- 0.166 Consensus geometry
|
Consensus Sequence: | phGhp |
(φψ)-conformation: | aalbb |
Pattern: | x | [afgilmvwy] | x | [adeknqrs] | [afiklmt] | [AGNRS] | [acfgilmvy] | [ehknqrt] | x |
Conservation: | -0.704 | -0.266 | 0.018 | 0.168 | -0.333 | 2.540 | -0.575 | -0.148 | -0.700 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b33_N_33 | 1b33 | N | 42 | 50 | RIQKMGGKI | HHHHTT-EE | aaaaavxbx |
1bup_A_152 | 1bup | A | 161 | 169 | AGTIAGLNV | HHHHTT-EE | aaaaavxbx |
1f0l_A_310 | 1f0l | A | 310 | 317 | IGSVMGIA. | HHHHHTEE. | aaaaavbb. |
1f1u_A_163 | 1f1u | A | 169 | 177 | YLEDLGFRV | HHHHTT-EE | aaaaagxbx |
1g60_A_76 | 1g60 | A | 85 | 93 | YLVSKGMIF | HHHHTT-EE | aaaaavxbx |
1g6h_A_76 | 1g6h | A | 78 | 86 | ELYHYGIVR | HHHHHTEEE | aaaaavbbb |
1hc7_A_41 | 1hc7 | A | 57 | 65 | MFKETGHQN | HHHHTT-EE | aaaaavxbx |
1jdp_A_167 | 1jdp | A | 178 | 186 | VFQEEGLHT | HHHHHT-EE | aaaaavxxb |
1js3_A_219 | 1js3 | A | 228 | 236 | RDKAAGLIP | HHHHTT-EE | aaaaavxbx |
1jv1_A_418 | 1jv1 | A | 432 | 440 | WVLNAGGHF | HHHHTT-EE | aaaaavxbb |
1k47_A_306 | 1k47 | A | 315 | 323 | RWADLGIEL | HHHHTT-EE | aaaaavxxx |
1kll_A_82 | 1kll | A | 91 | 99 | ELVDAGYEG | HHHHTT-EE | aaaaagxxx |
1ky8_A_342 | 1ky8 | A | 354 | 362 | DAVEKGGRV | HHHHTT-EE | aaaaagxbx |
1lrz_A_130 | 1lrz | A | 134 | 142 | KMSNLGFEH | HHHHTT-EE | aaaaavxxx |
1m1n_B_373 | 1m1n | B | 382 | 390 | FLLELGCEP | HHHHTT-EE | aaaaavxbw |
1m22_A_149 | 1m22 | A | 153 | 161 | RLRDAGAVV | HHHHTT-EE | aaaaavxbx |
1mkp_*_225 | 1mkp | - | 227 | 235 | VLEEFGIKY | HHHHTTEEE | aaaaavxab |
1mkz_A_28 | 1mkz | A | 36 | 44 | SAQEAGHHV | HHHHTT-EE | aaaaagxbx |
1np7_A_88 | 1np7 | A | 95 | 103 | IAKQINAKT | HHHHTTEEE | aaaaavxab |
1o9p_A_89 | 1o9p | A | 93 | 101 | MLKRAGATI | HHHHTT-EE | aaaaavxbx |
1ohe_A_246 | 1ohe | A | 251 | 259 | YFKNHNVTT | HHHHTTEEE | aaaaalxab |
1pp7_U_80 | 1pp7 | U | 86 | 94 | NLRDLAFEQ | HHHHTT-EE | aaaaavxbx |
1qh4_A_308 | 1qh4 | A | 311 | 319 | VLKRLRLQK | HHHHHTEEE | aaaaalbbb |
1rtq_A_156 | 1rtq | A | 164 | 172 | QYKSEGKNV | HHHHTT-EE | aaaaavxxx |
1xo1_A_44 | 1xo1 | A | 54 | 62 | LAKSYSART | HHHHTTEEE | aaaaalxab |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | Y - 33 |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | E - 34 |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | W - 36 |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | F - 37 |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | Q - 40 |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | Q - 41 |
1b33_N_33 | 1b33 | N | CYCPHYCOCYANOBILIN | Q - 44 |
1g6h_A_76 | 1g6h | A | HGCMETHYL MERCURY ION | A - 77 |
1js3_A_219 | 1js3 | A | PLPPYRIDOXAL-5'-PHOSPHATE | T - 242 |
1kll_A_82 | 1kll | A | MSESELENOMETHIONINE | K - 88 |
1kll_A_82 | 1kll | A | MSESELENOMETHIONINE | L - 92 |
1mkz_A_28 | 1mkz | A | MSESELENOMETHIONINE | L - 33 |
1pp7_U_80 | 1pp7 | U | ZNZINC ION | V - 85 |
1rtq_A_156 | 1rtq | A | ZNZINC ION | Q - 177 |
Clusters included in this Subclass |
CLUSTER: HE.2.10 |