Information on SUBCLASS 4.34.1 |
Subclass Accession number: 690
Subclass: 4.34.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %) 4.1 (>75 %) 4.1.1 (>75 %) 4.1.1.49 GO : GO:0004611 (>75 %) GO:0005524 (>75 %) GO:0005525 (>75 %) GO:0016829 (>75 %) GO:0016830 (>75 %) GO:0016831 (>75 %) GO:0017076 (>75 %) GO:0019001 (>75 %) GO:0030554 (>75 %) SCOP : 53794 (>75 %) 53795 (>75 %) 53796 (>75 %) |
Number of loops: 3 Average sequence ID (%) : 7.1 +/- 10.1 Average RMSD (Å) : 0.733 +/- 0.252 Consensus geometry
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Consensus Sequence: | hXhcpXpX |
(φψ)-conformation: | bbplalbb |
Pattern: | x | x | [HVY] | [ALV] | x | [MPW] | [GN] | [HST] | [GS] | [HRT] | x | x | [TV] | x |
Conservation: | -1.190 | -1.190 | 0.322 | -0.027 | -0.492 | -0.376 | 2.019 | 0.089 | 1.819 | -0.027 | -0.725 | -0.725 | 0.996 | -0.492 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1e1a_A_239 | 1e1a | A | 239 | 252 | LLVANWGSSHIEVF | EEEEEETTTEEEEE | bxbxxpvavbbxbb |
1gl4_A_421 | 1gl4 | A | 429 | 442 | HSYVVMNHGRSYTA | EEEEETTT-EEEEE | bbbbbpvavbbbbb |
1q40_A_81 | 1q40 | A | 89 | 102 | DGHLIPGTGTFVVH | EEEEETTTTEEEEE | bbbxxxvavbxxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1q40_A_81 | 1q40 | A | GOLGLYCEROL | T - 86 |
1q40_A_81 | 1q40 | A | GOLGLYCEROL | S - 87 |
1q40_A_81 | 1q40 | A | MSESELENOMETHIONINE | D - 89 |
1q40_A_81 | 1q40 | A | MSESELENOMETHIONINE | V - 100 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1e1a_A_239 | 1e1a | A | DFPDFP BINDING SITE | W - 244 |
Clusters included in this Subclass |
CLUSTER: HA.3.198 |