Information on SUBCLASS 12.4.1 |
Subclass Accession number: 6922
Subclass: 12.4.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 39.4 +/- 13.4 Average RMSD (Å) : 0.833 +/- 0.153 Consensus geometry
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Consensus Sequence: | pAXHChXcXXpXpphX |
(φψ)-conformation: | bbaaaaaabapaaabb |
Pattern: | [W] | [V] | [ILV] | [ST] | [A] | [AT] | [H] | [C] | [FL] | x | [DK] | x | [KP] | [KNR] | x | [ERS] | [DNS] | [LY] | [IK] | [AV] | [IVY] | [L] |
Conservation: | 2.861 | 0.280 | -0.212 | -0.189 | 0.280 | -0.360 | 1.755 | 2.123 | -0.135 | -0.908 | -0.337 | -0.990 | -0.115 | -0.376 | -0.908 | -0.703 | -0.376 | -0.169 | -0.885 | -0.417 | -0.499 | 0.280 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ddj_A_597 | 1ddj | A | 597 | 618 | WVLTAAHCLEKSPRPSSYKVIL | EEEE-GGGGTT-S-GGG-EEEE | bbbbbaaaaaabaxaaabbbbb |
1gj7_B_51 | 1gj7 | B | 51 | 72 | WVISATHCFIDYPKKEDYIVYL | EEEE-GGGTTT---GGGEEEEE | bbbbbaaaaaabaxaaabbbbb |
1kli_H_51 | 1kli | H | 51 | 72 | WVVSAAHCFDKIKNWRNLIAVL | EEEE-GGGGTT-S-GGGEEEEE | bbbbbaaaaaaxabaaaxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | H - 57 |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | C - 58 |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | F - 59 |
1gj7_B_51 | 1gj7 | B | 1326-CHLORO-2-(2-HYDROXY-BIPHENYL-3-YL)-1H-INDOLE-5-CARBOXAMIDINE | I - 60 |
1kli_H_51 | 1kli | H | GOLGLYCEROL | A - 56 |
1kli_H_51 | 1kli | H | BENBENZAMIDINE | H - 57 |
1kli_H_51 | 1kli | H | GOLGLYCEROL | F - 59 |
1kli_H_51 | 1kli | H | GOLGLYCEROL | D - 60 |
Clusters included in this Subclass |
CLUSTER: AR.13.17 |