Information on SUBCLASS 13.2.1 |
Subclass Accession number: 6930
Subclass: 13.2.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 57.7 +/- -1.4 Average RMSD (Å) : 0.367 +/- 0.115 Consensus geometry
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Consensus Sequence: | VXPcXhMXhXGpppPCA |
(φψ)-conformation: | bbplppbbbllbappbb |
Pattern: | [AN] | [V] | [HT] | [V] | x | [P] | [DG] | x | [AL] | [M] | [AT] | [FL] | [GS] | [G] | [ST] | [NST] | [DE] | [P] | [C] | [A] | x | [CL] | [S] | [IL] | [HS] | [S] |
Conservation: | -1.009 | 0.275 | -0.517 | 0.275 | -1.361 | 1.779 | -0.462 | -1.067 | -0.968 | 0.776 | -0.606 | -0.421 | -0.526 | 1.277 | -0.366 | -0.672 | 0.135 | 1.779 | 2.781 | 0.275 | -1.113 | -0.223 | 0.275 | -0.222 | -0.372 | 0.275 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dpt_A_38 | 1dpt | A | 38 | 63 | NVTVRPGLAMALSGSTEPCAQLSISS | EEEEE-S----BTTB-SS-EEEEEEE | bbbbbxvxbbbblvbaxpbbbbbbbb |
1gd0_A_38 | 1gd0 | A | 38 | 63 | AVHVVPDQLMAFGGSSEPCALCSLHS | EEEEE-S----BTTB-SS-EEEEEEE | bbbbbxlxxbbbvvbaxpbbbbbbbb |
1mfi_A_38 | 1mfi | A | 38 | 63 | AVHVVPDQLMTFSGTNDPCALCSLHS | EEEEE-S----BTTB-SS-EEEEEEE | bbbbbxvxxbbbvvbaxpbbbbbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | H - 40 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | V - 42 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | M - 47 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | L - 58 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | C - 59 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | S - 60 |
1gd0_A_38 | 1gd0 | A | CITCITRIC ACID | H - 62 |
1mfi_A_38 | 1mfi | A | FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE | H - 62 |
1mfi_A_38 | 1mfi | A | FHC2-FLUORO-3-(4-HYDROXYPHENYL)-2E-PROPENEOATE | S - 63 |
Clusters included in this Subclass |
CLUSTER: AR.13.14 |