Information on SUBCLASS 22.1.1 |
Subclass Accession number: 6943
Subclass: 22.1.1 Type: AR beta-beta link DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 5 Average sequence ID (%) : 57.6 +/- 21.5 Average RMSD (Å) : 0.280 +/- 0.084 Consensus geometry
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Consensus Sequence: | IPhApPPhGpXRFXXPpXXpXWSchh |
(φψ)-conformation: | pwabpppbeaaplpppbppppbbebp |
Pattern: | [IV] | [HST] | [AV] | [FY] | [LT] | [G] | [I] | [P] | [FY] | [A] | [EKQ] | [P] | [P] | [LMV] | [EG] | [DNPRS] | x | [R] | [F] | [kmr] | [KPR] | [P] | x | [PS] | [AKL] | [EKQRT] | [KP] | [W] | [HS] | [DG] | [IV] | [LVW] | [DN] |
Conservation: | 0.004 | -0.875 | -0.569 | 0.505 | -0.708 | 1.022 | 0.187 | 1.439 | 0.516 | 0.187 | -0.392 | 1.439 | 1.439 | -0.527 | -0.540 | -1.250 | -0.933 | 0.604 | 1.022 | -1.063 | -0.737 | 1.439 | -0.947 | -0.234 | -1.215 | -0.966 | -0.182 | 3.109 | -0.558 | -0.308 | -0.003 | -0.886 | -0.020 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b41_A_29 | 1b41 | A | 29 | 61 | VSAFLGIPFAEPPMGPRRFLPPEPKQPWSGVVD | EEEEEEEE-B----GGGTTS---B----SSEEE | bxbbbvxwabxpaxeaapvxpxbpxxpbxebxx |
1dx4_A_24 | 1dx4 | A | 26 | 58 | VHVYTGIPYAKPPVEDLRFRKPVPAEPWHGVLD | EEEEEEEE-S----GGGTTS--------SS-EE | bxbbbvxwabxpxbeaaxvxpxbpxxpbbexxx |
1ea5_A_25 | 1ea5 | A | 27 | 59 | ISAFLGIPFAEPPVGNMRFRRPEPKKPWSGVWN | EEEEEEEE-B----GGGTTS---B----SSEEE | bxbbbvxwabxpxbeaapvxxxbpxxpbxebxx |
1n5m_A_27 | 1n5m | A | 29 | 61 | VSAFLGIPFAEPPVGSRRFMPPEPKRPWSGVLD | EEEEEEEE-B----GGGTTS---B----SSEEE | bxbbbvxwabxpabeaapvxpxbpxxpbbexxx |
1p0i_A_23 | 1p0i | A | 25 | 57 | VTAFLGIPYAQPPLGRLRFKKPQSLTKWSDIWN | EEEEEEEE-S----GGGTTS---------SEEE | bbbbbvxxabxpxbeaaxvxxwbxxxpbbebxx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dx4_A_24 | 1dx4 | A | BMABETA-D-MANNOSE | T - 30 |
1ea5_A_25 | 1ea5 | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 59 |
1n5m_A_27 | 1n5m | A | IODIODIDE ION | G - 27 |
1n5m_A_27 | 1n5m | A | IODIODIDE ION | P - 28 |
1p0i_A_23 | 1p0i | A | GOLGLYCEROL | A - 27 |
1p0i_A_23 | 1p0i | A | GOLGLYCEROL | L - 29 |
1p0i_A_23 | 1p0i | A | NAGN-ACETYL-D-GLUCOSAMINE | D - 54 |
1p0i_A_23 | 1p0i | A | NAGN-ACETYL-D-GLUCOSAMINE | I - 55 |
1p0i_A_23 | 1p0i | A | NAGN-ACETYL-D-GLUCOSAMINE | W - 56 |
1p0i_A_23 | 1p0i | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 57 |
Clusters included in this Subclass |
CLUSTER: AR.23.1 |