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Information on SUBCLASS 1.1.9
Subclass Accession number: 7025
Subclass: 1.1.9 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 33

Average sequence ID (%) : 8.9 +/- 14.2
Average RMSD (Å) : 0.606 +/- 0.134

Consensus geometry
d (Å): 7 delta (°): 0-45 theta (°): 45-90 rho (°): 270-315
Consensus Sequence: XhXXX
(φψ)-conformation: bbpaa
Pattern: x[afgilmpvy][adgknqrst]xxxx
Conservation:-0.397-0.9851.991-0.232-0.8210.0220.421
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a8r_A_1301a8r   A131137VIGLSKIEE-HHHHbxxaaaa
1bjt_*_7181bjt   -718724ELKVAQLEEHHHHHxbxaaaa
1bu6_O_461bu6   O4652EHDPMEIEE-HHHHbbbaaaa
1bxn_A_3101bxn   A310316GVSFRVIEE-HHHHebxaaaa
1c4k_A_2951c4k   A296302IYNAHEVEE-HHHHbxbaaaa
1c4k_A_3461c4k   A350356VQSVHKQEE-HHHHxbxaaaa
1cl1_A_3461cl1   A349355ANQPEHIEE-HHHHbbxaaaa
1ges_A_3681ges   A375381FTAMYTAEE-HHHHbbpaaaa
1gk8_A_3081gk8   A308314GIHFRVLEE-HHHHebxaaaa
1i8d_A_1791i8d   A183189EIDPQTQEE-HHHHbxpaaaa
1iag_*_61iag   -1319VADRRVFEE-HHHHbbxaaaa
1ii2_A_681ii2   A6874KLSEESFEE-HHHHxbxaaaa
1jsw_A_3951jsw   A395401TANKEVCEE-HHHHbbbaaaa
1k4g_A_671k4g   A6874LGNTYHLEE-HHHHbbxaaaa
1k6w_A_2711k6w   A273279VANPLVNEE-HHHHbbbaaaa
1k8t_A_4941k8t   A498504APSLTEIEEBHHHHbxxaaaa
1kbl_A_3801kbl   A380386TFNPAALEE-HHHHbxxaaaa
1l1l_A_4211l1l   A423429EVFPLIAEE-HHHHbbbaaaa
1ltk_A_3141ltk   A314320DAGPKSIEE-HHHHbxxaaaa
1mdb_A_4391mdb   A439445KVAAEEVEE-HHHHxbxaaaa
1nd1_A_101nd1   A1319VADHGIFEE-HHHHbbxaaaa
1nth_A_4351nth   A435441TPTEEYMEE-HHHHbxxaaaa
1nvt_A_841nvt   A8490EIDKDAQEE-HHHHbbxaaaa
1ogi_A_1131ogi   A113119VYGVCSTEE-HHHHbbxaaaa
1php_*_2911php   -294300DIGPKTREE-HHHHbxxaaaa
1pkh_A_1101pkh   A115121QGRSSLGEE-HHHHbxxaaaa
1q5n_A_3501q5n   A350356EVNAENMEE-HHHHbxbaaaa
1r3s_A_1511r3s   A155161AGAPWTLEE-HHHHbxxaaaa
1ual_A_611ual   A6167LMMVQPLEE-HHHHbxxaaaa
1ued_A_251ued   A2531DPHEDNFEE-HHHHxxxaaaa
2tpt_*_3492tpt   -353359EMDTRALEE-HHHHbbxaaaa
5rub_A_3025rub   A302308GYTAFVHEE-HHHHebxaaaa
8ruc_A_3088ruc   A308314GMHFRVLEE-HHHHebxaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE V - 131
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE I - 132
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE G - 133
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE L - 134
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE S - 135
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE K - 136
1a8r_A_1301a8r   A     GTPGUANOSINE-5'-TRIPHOSPHATE R - 139
1c4k_A_3461c4k   A     PLPPYRIDOXAL-5'-PHOSPHATE S - 352
1c4k_A_3461c4k   A     PLPPYRIDOXAL-5'-PHOSPHATE H - 354
1c4k_A_3461c4k   A     PLPPYRIDOXAL-5'-PHOSPHATE K - 355
1cl1_A_3461cl1   A     BCTBICARBONATE ION L - 348
1gk8_A_3081gk8   A     EGLETHYLENE GLYCOL H - 310
1gk8_A_3081gk8   A     EGLETHYLENE GLYCOL F - 311
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE L - 318
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE R - 319
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE M - 320
1gk8_A_3081gk8   A     HYP4-HYDROXYPROLINE S - 321
1iag_*_61iag   *     CACALCIUM ION Y - 7
1iag_*_61iag   *     CACALCIUM ION I - 8
1iag_*_61iag   *     CACALCIUM ION E - 9
1k4g_A_671k4g   A     AIQ2,6-DIAMINO-8-(1H-IMIDAZOL-2-YLSULFANYLMETHYL)-3H-QUINAZOLINE-4-ONE L - 68
1k4g_A_671k4g   A     AIQ2,6-DIAMINO-8-(1H-IMIDAZOL-2-YLSULFANYLMETHYL)-3H-QUINAZOLINE-4-ONE N - 70
1k6w_A_2711k6w   A     FEFE (III) ION N - 275
1ltk_A_3141ltk   A     AMPADENOSINE MONOPHOSPHATE D - 314
1ltk_A_3141ltk   A     MSESELENOMETHIONINE V - 326
1ogi_A_1131ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE Y - 114
1ogi_A_1131ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 115
1ogi_A_1131ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE V - 116
1ogi_A_1131ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE C - 117
1ogi_A_1131ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE S - 118
1ogi_A_1131ogi   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 119
1php_*_2911php   *     ADPADENOSINE-5'-DIPHOSPHATE A - 292
1php_*_2911php   *     ADPADENOSINE-5'-DIPHOSPHATE L - 293
1php_*_2911php   *     ADPADENOSINE-5'-DIPHOSPHATE D - 294
1r3s_A_1511r3s   A     1CPCOPROPORPHYRIN I F - 154
1r3s_A_1511r3s   A     1CPCOPROPORPHYRIN I T - 160
1r3s_A_1511r3s   A     1CPCOPROPORPHYRIN I Y - 164
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1ogi_A_1131ogi   A AC1FAD BINDING SITE FOR CHAIN AG - 115
1ogi_A_1131ogi   A AC1FAD BINDING SITE FOR CHAIN AC - 117
1ogi_A_1131ogi   A AC1FAD BINDING SITE FOR CHAIN AS - 118

Clusters included in this Subclass
CLUSTER: EH.0.9
CLUSTER: EH.1.13
CLUSTER: EH.2.14