Information on SUBCLASS 5.1.9 |
Subclass Accession number: 704
Subclass: 5.1.9 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 13.3 +/- 13.6 Average RMSD (Å) : 0.867 +/- 0.306 Consensus geometry
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Consensus Sequence: | XXpXpGXhX |
(φψ)-conformation: | bbpaagpba |
Pattern: | x | x | x | x | [DT] | [AEK] | [HS] | [G] | [AKR] | [IV] | x | [GKT] | [AKM] | [QRY] | [ARS] |
Conservation: | -0.824 | -0.375 | -0.599 | -0.899 | 0.685 | -0.225 | 0.371 | 2.923 | -0.075 | 1.266 | -0.599 | -0.674 | -0.525 | -0.150 | -0.300 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1fl2_A_303 | 1fl2 | A | 303 | 317 | HQIETASGAVLKARS | EEEEETTS-EEEEEE | xbbxbaagxbbbbab |
1fo6_A_105 | 1fo6 | A | 112 | 126 | SILVDKSGKIVGKYR | EEEE-TTS-EEEEEE | bbbbxaagxxabbbb |
1oh0_A_96 | 1oh0 | A | 104 | 118 | VMRFDEHGRIQTMQA | EEEE-TTS-EEEEEE | bbbbxaavbxabbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1oh0_A_96 | 1oh0 | A | EQUEQUILENIN | L - 99 |
1oh0_A_96 | 1oh0 | A | EQUEQUILENIN | V - 101 |
1oh0_A_96 | 1oh0 | A | EQUEQUILENIN | D - 103 |
1oh0_A_96 | 1oh0 | A | EQUEQUILENIN | M - 105 |
1oh0_A_96 | 1oh0 | A | EQUEQUILENIN | M - 116 |
1oh0_A_96 | 1oh0 | A | EQUEQUILENIN | A - 118 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1oh0_A_96 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | D - 103 |
1oh0_A_96 | 1oh0 | A | AC1EQU BINDING SITE FOR CHAIN A | M - 116 |
Clusters included in this Subclass |
CLUSTER: HA.4.172 |