Information on SUBCLASS 1.2.8 |
Subclass Accession number: 7087
Subclass: 1.2.8 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 23.0 +/- 21.0 Average RMSD (Å) : 0.443 +/- 0.140 Consensus geometry
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Consensus Sequence: | hpGpX |
(φψ)-conformation: | bbeaa |
Pattern: | [FLVY] | [GILV] | [AGS] | [HRSTW] | [GS] | [DRSTY] | [epqs] | [GLVY] | x | [HILVY] | [acstv] | x | [AES] | [AGLV] | [ALY] | [adeks] | x | [hl] |
Conservation: | 0.588 | 0.093 | 1.018 | -0.443 | 3.061 | -0.630 | -0.528 | -0.420 | -1.341 | -0.218 | -0.284 | -0.703 | 1.192 | -0.108 | 0.316 | -0.654 | -0.900 | -0.038 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1gpu_A_557 | 1gpu | A | 559 | 576 | LVATGSEVSLSVEAAKTL | EEE-THHHHHHHHHHHHH | bbbbeaaaaaaaaaaaaa |
1l8a_A_724 | 1l8a | A | 728 | 745 | LLGSGSILRHVREAAEIL | EEE-GGGHHHHHHHHHHH | bbbbeaaaaaaaaaaaaa |
1moq_*_466 | 1moq | - | 469 | 486 | FLGRGDQYPIALEGALKL | EEE-GGGHHHHHHHHHHH | bbbbeaaaaaaaaaaaaa |
1ni4_B_207 | 1ni4 | B | 209 | 226 | VVSHSRPVGHCLEAAAVL | EEE-STHHHHHHHHHHHH | bbbbeaaaaaaaaaaaaa |
1ols_B_222 | 1ols | B | 224 | 241 | LVAWGTQVHVIREVASMA | EEE-TTHHHHHHHHHHHH | bbbbeaaaaaaaaaaaaa |
1qgd_A_552 | 1qgd | A | 554 | 571 | FIATGSEVELAVAAYEKL | EEE-GGGHHHHHHHHHHH | xbbbeaaaaaaaaaaaaa |
1ryp_K_129 | 1ryp | K | 129 | 146 | YGAHGYSGFYTFSLLDHH | EEE-TTHHHHHHHHHHHH | bbbbeaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1moq_*_466 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | R - 472 |
1moq_*_466 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | D - 474 |
1moq_*_466 | 1moq | * | MES2-(N-MORPHOLINO)-ETHANESULFONIC ACID | Q - 475 |
1moq_*_466 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | Y - 476 |
1moq_*_466 | 1moq | * | MPD2-METHYL-2,4-PENTANEDIOL | L - 480 |
1moq_*_466 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | L - 484 |
1moq_*_466 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | K - 485 |
1moq_*_466 | 1moq | * | GLPGLUCOSAMINE 6-PHOSPHATE | E - 488 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | T - 208 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | V - 210 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | S - 211 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | H - 212 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | S - 213 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | R - 214 |
1ni4_B_207 | 1ni4 | B | MSESELENOMETHIONINE | V - 216 |
Clusters included in this Subclass |
CLUSTER: EH.3.34 |
CLUSTER: EH.4.18 |