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Information on SUBCLASS 2.1.23
Subclass Accession number: 7145
Subclass: 2.1.23 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 11.9 +/- 12.9
Average RMSD (Å) : 0.775 +/- 0.171

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXXcXX
(φψ)-conformation: bbabaa
Pattern: [FIT]xx[ADPS][DN][CGT]xxx[AG]xx[ILVY]x
Conservation:0.165-0.667-0.851-0.1762.4620.036-0.667-0.657-0.4831.574-1.341-0.0570.5600.100
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
13pk_A_10813pk   A108121TFAPDCLNAADVVSEEES-TTS-HHHHHxxxabaaaaaaaaa
1gpu_A_621gpu   A6376FVLSNGHAVALLYSEEESSGGGHHHHHHbbxaxaaaaaaaaa
1lam_*_3251lam   -326339IQVDNTDAEGRLILEEES-TT--HHHHHbxxabaaaaaaaaa
1o94_A_5301o94   A533546ILNADTYFMAPSLAEEE---SSHHHHHHbbbabaFaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE N - 67
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE G - 68
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE H - 69
1gpu_A_621gpu   A     THD2-[3-[(4-AMINO-2-METHYL-5-PYRIMIDINYL)METHYL]-2-(1,2-DIHYDROXYETHYL)-4-METHYL-1,3-THIAZOL-3-IUM-5-YL]ETHYL TRIHYDROGEN DIPHOSPHATE A - 70
1lam_*_3251lam   *     ZNZINC ION T - 331
1lam_*_3251lam   *     ZNZINC ION D - 332
1lam_*_3251lam   *     CO3CARBONATE ION D - 332
1lam_*_3251lam   *     ZNZINC ION A - 333
1lam_*_3251lam   *     CO3CARBONATE ION A - 333
1lam_*_3251lam   *     ZNZINC ION E - 334
1lam_*_3251lam   *     CO3CARBONATE ION E - 334
1lam_*_3251lam   *     ZNZINC ION G - 335
1lam_*_3251lam   *     CO3CARBONATE ION G - 335
1lam_*_3251lam   *     CO3CARBONATE ION R - 336
1lam_*_3251lam   *     CO3CARBONATE ION L - 337
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gpu_A_621gpu   A AC2THD BINDING SITE FOR CHAIN AH - 69

Clusters included in this Subclass
CLUSTER: EH.6.87