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Information on SUBCLASS 2.5.5
Subclass Accession number: 7209
Subclass: 2.5.5 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 15.4 +/- 15.0
Average RMSD (Å) : 0.633 +/- 0.231

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 45-90
Consensus Sequence: XXGXhX
(φψ)-conformation: bbepaa
Pattern: x[HIV]xxx[G][PRS][FV][EGP][CMT][AG][KQ]x
Conservation:-0.947-0.325-0.671-0.602-0.3942.712-0.4630.202-0.463-0.1180.8440.966-0.740
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1a4s_A_2361a4s   A236248KVSFTGSVPTGKKEEEEES-HHHHHHbbbbbexaaaaaa
1m1n_A_791m1n   A7991IHISHGPVGCGQYEEEEESSSHHHHHbbxxbexaaaaaa
1qfj_A_1961qfj   A196208DIYIAGRFEMAKIEEEEES-HHHHHHbbbbbexaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER G - 84
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER P - 85
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER V - 86
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER G - 87
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER C - 88
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER G - 89
1m1n_A_791m1n   A     CLFFE(8)-S(7) CLUSTER Y - 91
1qfj_A_1961qfj   A     GOLGLYCEROL F - 203

Clusters included in this Subclass
CLUSTER: EH.3.250