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Information on SUBCLASS 2.8.1
Subclass Accession number: 7220
Subclass: 2.8.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 5

Average sequence ID (%) : 26.8 +/- 26.5
Average RMSD (Å) : 0.960 +/- 0.055

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hXhXXX
(φψ)-conformation: bbpeaa
Pattern: [ALV][AIV]x[IV][GT][IPY][GS][GTV][GS]x[AL][GPS][AFP]x[agm][AFV][IMT][EGQ][AEGQ]
Conservation:0.2260.577-0.4341.9831.122-0.9771.825-0.7321.291-1.4930.283-0.089-0.948-0.768-1.121-0.4760.2320.125-0.626
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1b0z_A_741b0z   A7593LVVIGIGGSYLGARAAIEAEEEE--GGGTHHHHHHHHHxbxbbbeaaaaaaaaaaaa
1ddg_A_4551ddg   A455473VIMIGPGTGIAPFRAFMQQEEEE--GGGGHHHHHHHHHbbbbbxeaaaaaaaaaaaa
1iat_A_1501iat   A151169VINIGIGGSDLGPLMVTEAEEEE--GGGTHHHHHHHHHbbxbbbeaaaaaaaaaaaa
1ja1_A_5281ja1   A528546VIMVGPGTGIAPFMGFIQEEEEE--GGGGHHHHHHHHHbbbbbxeaaaaaaaaaaaa
1zpd_A_671zpd   A6886AAVVTYSVGALSAFDAIGGEEEE-TTTTHHHHHHHHHHbbbbxxGaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 462
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE G - 463
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 465
1ddg_A_4551ddg   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 466
1iat_A_1501iat   A     SULSULFATE ANION I - 156
1iat_A_1501iat   A     SULSULFATE ANION G - 158
1iat_A_1501iat   A     SULSULFATE ANION S - 159
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE P - 533
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 534
1ja1_A_5281ja1   A     FADFLAVIN-ADENINE DINUCLEOTIDE T - 535
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 535
1ja1_A_5281ja1   A     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 536
1ja1_A_5281ja1   A     FADFLAVIN-ADENINE DINUCLEOTIDE A - 538
1ja1_A_5281ja1   A     FADFLAVIN-ADENINE DINUCLEOTIDE P - 539
1zpd_A_671zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER T - 72
1zpd_A_671zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER V - 75
1zpd_A_671zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER G - 76
1zpd_A_671zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER S - 79
1zpd_A_671zpd   A     DPXMONO-{4-[(4-AMINO-2-METHYL-PYRIMIDIN-5-YLMETHYL)-AMINO]-2-HYDROXY-3-MERCAPTO-PENT-3-ENYL-PHOSPHONO} ESTER D - 82

Clusters included in this Subclass
CLUSTER: EH.6.55