ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 3.1.2

Subclass Accession number: 7231
Subclass: 3.1.2

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 9

Average sequence ID (%) : 34.6 +/- 25.6
Average RMSD (Å) : 0.622 +/- 0.186

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 90-135

Consensus Sequence:	hhGXcXh
(φψ)-conformation:	bbeapaa

Pattern:	[ILV]	[GLV]	[ilv]	[ILV]	[G]	[AGNS]	[GNR]	[degps]	[agim]	[AGST]	x
Conservation:	0.556	-0.411	-0.096	0.612	2.436	-0.182	0.280	-0.936	-0.988	-0.169	-1.102

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1a4i_A_37	1a4i	A	40	50	ILQVGNRDDSN	EEEES--HHHH	bbbbeaxaaaa
1b0a_A_35	1b0a	A	38	48	VVLVGSNPASQ	EEEES--HHHH	bbbbeaxaaaa
1fec_A_4	1fec	A	6	16	LVVIGAGSGGL	EEEE--SHHHH	bbbxeabaaaa
1gpj_A_169	1gpj	A	170	180	VLVVGAGEMGK	EEEES--HHHH	bbbbeapaaaa
1lvl_*_8	1lvl	-	8	18	LLIIGGGPGGY	EEEE--SHHHH	bbbbeabaaaa
1onf_A_177	1onf	A	178	188	IGIVGSGYIAV	EEEE--SHHHH	bbbbeaxaaaa
1p77_A_121	1p77	A	122	132	VLILGAGGATK	EEEE--SHHHH	bbbxeaxaaaa
1qo8_A_120	1qo8	A	124	134	VLVVGAGSAGF	EEEE--SHHHH	bxbxeaxaaaa
1trb_*_3	1trb	-	8	18	LLILGSGPAGY	EEEE--SHHHH	bbbxeaxaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1a4i_A_37	1a4i	A	NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE	Y - 52
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 9
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 10
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 11
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 12
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	S - 13
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 14
1fec_A_4	1fec	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 15
1lvl_*_8	1lvl	*	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 11
1lvl_*_8	1lvl	*	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 13
1lvl_*_8	1lvl	*	FADFLAVIN-ADENINE DINUCLEOTIDE	P - 15
1lvl_*_8	1lvl	*	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 16
1lvl_*_8	1lvl	*	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 17
1onf_A_177	1onf	A	FADFLAVIN-ADENINE DINUCLEOTIDE	Y - 185
1onf_A_177	1onf	A	FADFLAVIN-ADENINE DINUCLEOTIDE	I - 186
1onf_A_177	1onf	A	FADFLAVIN-ADENINE DINUCLEOTIDE	E - 189
1onf_A_177	1onf	A	FADFLAVIN-ADENINE DINUCLEOTIDE	L - 190
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	L - 125
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	G - 126
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	A - 127
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	G - 128
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	G - 129
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	A - 130
1p77_A_121	1p77	A	ATR2'-MONOPHOSPHOADENOSINE-5'-DIPHOSPHATE	T - 131
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	V - 127
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 128
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 129
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 130
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	S - 131
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 132
1qo8_A_120	1qo8	A	FADFLAVIN-ADENINE DINUCLEOTIDE	G - 133
1trb_*_3	1trb	*	FADFLAVIN-ADENINE DINUCLEOTIDE	L - 11
1trb_*_3	1trb	*	FADFLAVIN-ADENINE DINUCLEOTIDE	A - 16

Clusters included in this Subclass

CLUSTER: EH.4.43