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| Information on SUBCLASS 5.8.2 |
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Subclass Accession number: 727
Subclass: 5.8.2 
Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: 
 Consensus coordinates:
Conserved Annotation EC : 3.1 (>50 %) 3.1.3 (>50 %) 3.1.3.48 GO : GO:0016788 (>50 %) GO:0016791 (>50 %) GO:0042578 (>50 %) SCOP : 52798 (>50 %) 52799 (>50 %) 52805 (>50 %) |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 16.4 Average RMSD (Å) : 0.925 +/- 0.287 Consensus geometry
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| Consensus Sequence: | XcXppXphX |
| (φψ)-conformation: | bpaaalpba |
| Pattern: | x | x | x | x | [DN] | x | [EKRY] | [ST] | [EG] | [ET] | [LV] | [AIKL] | x | x | x | [DENQ] | [AFI] | x | [IPY] |
| Conservation: | -0.249 | -0.448 | -0.329 | -0.750 | 1.996 | -1.013 | -0.195 | 1.445 | 1.317 | 1.207 | 1.368 | -0.795 | -1.068 | -0.849 | -0.577 | 0.678 | -0.006 | -1.068 | -0.666 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1go4_A_81 | 1go4 | A | 86 | 104 | VVISNIESGEVLERWQFDI | EEEEETTT--EEEEEEEEE | bxbbxaaavxxabbxbbxb |
| 1i12_A_65 | 1i12 | A | 65 | 83 | MVIVDKRTETVAATGNIII | EEEEETTTTEEEEEEEEEE | bbxbxaaalbxabbbbbbb |
| 1pn2_A_106 | 1pn2 | A | 113 | 131 | SKSVDNKSGELIYSNEATY | EEEEETTT--EEEEEEEEE | bbbbxaaavxxabbbbxbb |
| 3sil_*_313 | 3sil | - | 314 | 332 | LYAHNLYSGEVKLIDDFYP | EEEEE-TTT--EEEEEEEE | bbbbxaaavxbbxabxaba |
| PDB ligands within a cut-off distance of 6 Å in this subclass |
| Loop | PDB | Chain | Ligands | Residue |
| 1i12_A_65 | 1i12 | A | IMDIMIDAZOLE | I - 82 |
| 1i12_A_65 | 1i12 | A | IMDIMIDAZOLE | I - 83 |
| 1i12_A_65 | 1i12 | A | IMDIMIDAZOLE | E - 84 |
| Clusters included in this Subclass |
| CLUSTER: HA.5.104 |
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