|
|
|
|
|
|
|
| Information on SUBCLASS 3.4.1 |
|
Subclass Accession number: 73
Subclass: 3.4.1 Type: HA beta-beta hairpin DB: ArchDB-KI |
Number of loops: 3 Average sequence ID (%) : 26.7 +/- 0.4 Average RMSD (Å) : 0.57 +/- 0.17 Consensus geometry
|
| Consensus Sequence: | GpGXXGX |
| (φψ)-conformation: | ebpaaeb |
| Pattern: | [FLY] | [QR] | x | x | x | x | [IL] | [G] | [EQS] | [G] | x | x | [G] | x | [V] | [CWY] | [AKM] | [AG] | [RTY] | x |
| Conservation: | -0.071 | 0.372 | -1.061 | -1.061 | -0.875 | 0.020 | 0.336 | 1.972 | -0.256 | 1.972 | -0.380 | -0.380 | 1.972 | -0.813 | 0.858 | 0.053 | -0.875 | -0.030 | -0.937 | -0.813 |
| Loops included in this Subclass |
| Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
| 1ckp_*_4 | 1ckp | - | 4 | 23 | FQKVEKIGEGTYGVVYKARN | EEEEEEEEEETTEEEEEEEE | bbxaexaexxaaexbbxbbx |
| 1jnk_*_64 | 1jnk | - | 64 | 83 | YQNLKPIGSGAQGIVCAAYD | EEEEEEEEE-SSEEEEEEEE | xblxbxabbbaaexbbxbxb |
| 2src_*_267 | 2src | - | 267 | 286 | LRLEVKLGQGCFGEVWMGTW | EEEEEEEEE-SSEEEEEEEE | bbxabxaebxaaebbbxbbb |
| Clusters included in this Subclass |
| CLUSTER: HA.3.3 |
| For any comment or web-related incidence, send an email to the webmaster. |
|