Information on SUBCLASS 3.20.1 |
Subclass Accession number: 7310
Subclass: 3.20.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 18.6 +/- 17.5 Average RMSD (Å) : 0.400 +/- 0.082 Consensus geometry
|
Consensus Sequence: | XpPXhXp |
(φψ)-conformation: | pbwbpaa |
Pattern: | [AV] | [ILMY] | [IV] | x | [QST] | [P] | x | [FW] | x | [EHNS] | [HY] | [EGNP] | [ERST] | [AMV] | [CFLV] | x | x |
Conservation: | 0.025 | -0.226 | 0.828 | -0.948 | -0.132 | 2.539 | -0.665 | 1.408 | -0.791 | -0.194 | 1.575 | -0.666 | -0.509 | -0.151 | -0.509 | -0.571 | -1.011 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b5p_A_117 | 1b5p | A | 118 | 134 | VIVLSPYWVSYPEMVRF | EEEEES--THHHHHHHH | bxbxxwbpaaaaaaaaa |
1bw0_A_130 | 1bw0 | A | 131 | 147 | ALVPQPGFPHYETVCKA | EEEEES--THHHHHHHH | bxbwbwbxaaaaaaaaa |
1lc5_A_100 | 1lc5 | A | 101 | 117 | AMIVTPGFAEYGRALAQ | EEEEES--THHHHHHHH | bbbbbwbpaaaaaaaaa |
2cst_A_133 | 2cst | A | 133 | 149 | VYVSSPTWENHNSVFMD | EEEESS--THHHHHHHH | bbbxbwbxaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1b5p_A_117 | 1b5p | A | PO4PHOSPHATE ION | W - 125 |
1b5p_A_117 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | W - 125 |
1b5p_A_117 | 1b5p | A | PO4PHOSPHATE ION | V - 126 |
1b5p_A_117 | 1b5p | A | PLPPYRIDOXAL-5'-PHOSPHATE | Y - 128 |
1bw0_A_130 | 1bw0 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | F - 138 |
1bw0_A_130 | 1bw0 | A | LLP2-LYSINE(3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YLMETHANE) | Y - 141 |
1lc5_A_100 | 1lc5 | A | PIHYDROGENPHOSPHATE ION | F - 108 |
1lc5_A_100 | 1lc5 | A | PIHYDROGENPHOSPHATE ION | A - 109 |
2cst_A_133 | 2cst | A | PLPPYRIDOXAL-5'-PHOSPHATE | W - 140 |
2cst_A_133 | 2cst | A | MAEMALEIC ACID | W - 140 |
2cst_A_133 | 2cst | A | MAEMALEIC ACID | E - 141 |
2cst_A_133 | 2cst | A | PLPPYRIDOXAL-5'-PHOSPHATE | H - 143 |
Clusters included in this Subclass |
CLUSTER: EH.3.129 |
CLUSTER: EH.4.235 |