Information on SUBCLASS 4.4.2 |
Subclass Accession number: 7347
Subclass: 4.4.2 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 7 Average sequence ID (%) : 10.4 +/- 17.6 Average RMSD (Å) : 0.943 +/- 0.321 Consensus geometry
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Consensus Sequence: | XphXXpXp |
(φψ)-conformation: | bbppabaa |
Pattern: | x | [acfkm] | [AIKLT] | [adkt] | [fgpy] | x | x | [DKNRT] | [ehpt] | [kqsty] | [adq] | [AILV] | x | x | [aem] | x | x |
Conservation: | -0.622 | -0.945 | -0.064 | -0.225 | -0.438 | -0.981 | -0.515 | 1.265 | 0.412 | 0.034 | 0.885 | 2.865 | -0.896 | -0.288 | 0.832 | -0.518 | -0.800 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a53_*_107 | 1a53 | - | 108 | 124 | LMKDFIVKESQIDDAYN | EEES---SHHHHHHHHH | bxbbbxabaaaaaaaaa |
1dqu_A_73 | 1dqu | A | 73 | 89 | SFTYGCLDPTMVTQMAK | EEEEB--SHHHHHHHHH | bbbbxxabaaaaaaaaa |
1g99_A_50 | 1g99 | A | 52 | 68 | EKLTDLPTHKDALEEVV | EEE----SHHHHHHHHH | bbxbxbabaaaaaaaaa |
1i1q_A_9 | 1i1q | A | 13 | 29 | CDAAYRENPTALFHQVC | EEE---S-HHHHHHHHH | bxbxxbabaaaaaaaaa |
1i4n_A_105 | 1i4n | A | 106 | 122 | LAKDFYIDTVQVKLASS | EEE----STHHHHHHHH | xxxbxxabaaaaaaaaa |
1o7q_A_182 | 1o7q | A | 187 | 203 | FKIKPEKRWQDISMMRM | EE----SSHHHHHHHHH | bxbxxxaxaaaaaaaaa |
1pii_*_111 | 1pii | - | 112 | 128 | LCKDFIIDPYQIYLARY | EEES---SHHHHHHHHH | xxbbbxabaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1a53_*_107 | 1a53 | * | IGPINDOLE-3-GLYCEROL PHOSPHATE | K - 110 |
1a53_*_107 | 1a53 | * | IGPINDOLE-3-GLYCEROL PHOSPHATE | D - 111 |
1a53_*_107 | 1a53 | * | IGPINDOLE-3-GLYCEROL PHOSPHATE | F - 112 |
1i4n_A_105 | 1i4n | A | SULSULFATE ANION | K - 108 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | E - 192 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | R - 194 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | W - 195 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | Q - 196 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | D - 197 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | I - 198 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | S - 199 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | M - 200 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | M - 201 |
1o7q_A_182 | 1o7q | A | MNMANGANESE (II) ION | R - 202 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | R - 202 |
1pii_*_111 | 1pii | * | PO4PHOSPHATE ION | K - 114 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o7q_A_182 | 1o7q | A | AC7UDP BINDING SITE FOR CHAIN A | R - 194 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | W - 195 |
1o7q_A_182 | 1o7q | A | AC7UDP BINDING SITE FOR CHAIN A | D - 197 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | I - 198 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | S - 199 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | R - 202 |
Clusters included in this Subclass |
CLUSTER: EH.4.192 |
CLUSTER: EH.5.87 |
CLUSTER: EH.6.62 |