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PDB code:

Information on SUBCLASS 5.13.1

Subclass Accession number: 736 Subclass: 5.13.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1 (>75 %)

Number of loops: 7 Average sequence ID (%) : 8.6 +/- 13.0 Average RMSD (Å) : 0.829 +/- 0.435 Consensus geometry d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1ais_A_46	1ais	A	48	57	CHLDDPKVAL	EE-SSS--EE	bbxaaxxbbb
1bo4_A_86	1bo4	A	96	105	LPKFEQPRSE	EE-SSSS-EE	xxxaabxbbb
1dfu_P_72	1dfu	P	78	87	QRHPYKPKLQ	EE-SSSS-EE	bbpaabxbxa
1i7d_A_418	1i7d	A	426	435	ELDIAKGKFV	EE-STT--EE	bbbFaxpbbb
1jss_A_54	1jss	A	59	68	KPSEEFNGYL	EE-SSSSSEE	bpxaabxbbb
1k32_A_523	1k32	A	523	532	SPDRVVLNFS	EE-SSSS-EE	bxxaabxbbb
1up8_A_511	1up8	A	512	521	EVDKDEDKLV	EE-SSSSSEE	bxxaabxbxb

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1bo4_A_86	1bo4	A	SPDSPERMIDINE	I - 108
1bo4_A_86	1bo4	A	SPDSPERMIDINE	Y - 109
1bo4_A_86	1bo4	A	SPDSPERMIDINE	D - 110
1bo4_A_86	1bo4	A	COACOENZYME A	L - 111
1bo4_A_86	1bo4	A	COACOENZYME A	A - 112
1bo4_A_86	1bo4	A	COACOENZYME A	V - 113

PDB Site Annotated loops in this subclass

Loop	PDB	Chain	Site	Residue
1bo4_A_86	1bo4	A	ACOCOENZYME A BINDING RESIDUES IN MOL A OF NCS-HOMODIMER	L - 111
1bo4_A_86	1bo4	A	ACOCOENZYME A BINDING RESIDUES IN MOL A OF NCS-HOMODIMER	V - 113

Clusters included in this Subclass

CLUSTER: HA.6.70

CLUSTER: HA.7.11

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