Information on SUBCLASS 5.18.1 |
Subclass Accession number: 742
Subclass: 5.18.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: Conserved Annotation EC : 1.1 (>50 %) 1.1.99 (>50 %) 1.1.99.8 GO : GO:0005509 (>50 %) GO:0016614 (>50 %) GO:0018468 (>50 %) SCOP : 50997 (>50 %) 50998 (>50 %) 50999 (>50 %) |
Number of loops: 7 Average sequence ID (%) : 14.3 +/- 16.4 Average RMSD (Å) : 0.543 +/- 0.207 Consensus geometry
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Consensus Sequence: | hXXGppXXX |
(φψ)-conformation: | bbplbppbb |
Pattern: | [glmt] | [cnstw] | [HILV] | x | x | [aens] | [GN] | [aekq] | [ekrs] | [adqst] | x | [acnsv] |
Conservation: | -0.399 | -0.543 | 0.562 | -0.489 | -0.944 | -0.212 | 2.933 | 0.141 | 0.062 | -0.263 | -0.425 | -0.423 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1an8_*_104 | 1an8 | - | 104 | 115 | GNLFISGESQQN | EEEEETTS--EE | bbbbbpvbxpbx |
1bqu_A_12 | 1bqu | A | 15 | 26 | SCIVNEGKKMRC | EEEEETTS--EE | bbbbxpvbxxbb |
1dl5_A_302 | 1dl5 | A | 302 | 313 | MLHVGYNAFSHI | EEEEESSS--EE | xxbxxbvbxxbb |
1fmt_A_280 | 1fmt | A | 284 | 295 | LSLQPAGKKAMS | EEEEETTS--EE | abbbxpvbxxbx |
1fye_A_211 | 1fye | A | 211 | 222 | TWVFKAGEEAVA | EEEEETT---EE | xbbbbxvbpxbx |
1lyv_A_327 | 1lyv | A | 334 | 345 | LTIREAGQKTIS | EEEEETTS--EE | bbbbbpvbxxbb |
1o75_A_311 | 1o75 | A | 315 | 326 | LTLIANGYRDVV | EEEEETTS--EE | bbxbbpvbxpbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1bqu_A_12 | 1bqu | A | GOLGLYCEROL | E - 20 |
1bqu_A_12 | 1bqu | A | GOLGLYCEROL | R - 25 |
1dl5_A_302 | 1dl5 | A | CDCADMIUM ION | F - 310 |
1fye_A_211 | 1fye | A | CDCADMIUM ION | A - 222 |
1fye_A_211 | 1fye | A | CDCADMIUM ION | L - 223 |
1o75_A_311 | 1o75 | A | XEXENON | Y - 313 |
1o75_A_311 | 1o75 | A | XEXENON | L - 315 |
1o75_A_311 | 1o75 | A | XEXENON | V - 329 |
1o75_A_311 | 1o75 | A | XEXENON | F - 331 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o75_A_311 | 1o75 | A | AC1XE BINDING SITE FOR CHAIN A | F - 331 |
Clusters included in this Subclass |
CLUSTER: HA.4.147 |
CLUSTER: HA.6.37 |