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Information on SUBCLASS 5.3.4
Subclass Accession number: 7455
Subclass: 5.3.4 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 10.0 +/- 10.0
Average RMSD (Å) : 0.967 +/- 0.115

Consensus geometry
d (Å): 11 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: hhXXGpXXX
(φψ)-conformation: bbppgppaa
Pattern: x[PVY][IVY][AIK][EPR][G][DRT][PT][DPV][AE]x[GKL]x[AET]x[ILV][KR]x[ADV]x
Conservation:-0.534-0.4590.366-0.684-0.0843.140-0.3090.805-0.5340.572-0.309-0.984-0.684-0.159-0.9840.8901.557-0.309-0.609-0.684
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1ccw_A_1151ccw   A115134RVYAPGTPPEVGIADLKKDLEE--TT--HHHHHHHHHHHHbbbxpvxxaaaaaaaaaaaa
1meo_A_1481meo   A154173VPVKRGDTVATLSERVKLAEEE--TT--HHHHHHHHHHHHbxxbpvpbaaaaaaaaaaaa
1otf_A_31otf   A625LYIIEGRTDEQKETLIRQVSEEEES---HHHHHHHHHHHHbbbxpgxxaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN Y - 117
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN A - 118
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN P - 119
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN G - 120
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN T - 121
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN P - 122
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN P - 123
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN V - 125
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN G - 126
1ccw_A_1151ccw   A     CNCCO-CYANOCOBALAMIN I - 127
1meo_A_1481meo   A     PO4PHOSPHATE ION K - 170
1meo_A_1481meo   A     PO4PHOSPHATE ION H - 174

Clusters included in this Subclass
CLUSTER: EH.5.216
CLUSTER: EH.6.218