Information on SUBCLASS 5.3.4 |
Subclass Accession number: 7455
Subclass: 5.3.4 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 10.0 +/- 10.0 Average RMSD (Å) : 0.967 +/- 0.115 Consensus geometry
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Consensus Sequence: | hhXXGpXXX |
(φψ)-conformation: | bbppgppaa |
Pattern: | x | [PVY] | [IVY] | [AIK] | [EPR] | [G] | [DRT] | [PT] | [DPV] | [AE] | x | [GKL] | x | [AET] | x | [ILV] | [KR] | x | [ADV] | x |
Conservation: | -0.534 | -0.459 | 0.366 | -0.684 | -0.084 | 3.140 | -0.309 | 0.805 | -0.534 | 0.572 | -0.309 | -0.984 | -0.684 | -0.159 | -0.984 | 0.890 | 1.557 | -0.309 | -0.609 | -0.684 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ccw_A_115 | 1ccw | A | 115 | 134 | RVYAPGTPPEVGIADLKKDL | EE--TT--HHHHHHHHHHHH | bbbxpvxxaaaaaaaaaaaa |
1meo_A_148 | 1meo | A | 154 | 173 | VPVKRGDTVATLSERVKLAE | EE--TT--HHHHHHHHHHHH | bxxbpvpbaaaaaaaaaaaa |
1otf_A_3 | 1otf | A | 6 | 25 | LYIIEGRTDEQKETLIRQVS | EEEES---HHHHHHHHHHHH | bbbxpgxxaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | Y - 117 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | A - 118 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | P - 119 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | G - 120 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | T - 121 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | P - 122 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | P - 123 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | V - 125 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | G - 126 |
1ccw_A_115 | 1ccw | A | CNCCO-CYANOCOBALAMIN | I - 127 |
1meo_A_148 | 1meo | A | PO4PHOSPHATE ION | K - 170 |
1meo_A_148 | 1meo | A | PO4PHOSPHATE ION | H - 174 |
Clusters included in this Subclass |
CLUSTER: EH.5.216 |
CLUSTER: EH.6.218 |