Information on SUBCLASS 5.13.1 |
Subclass Accession number: 7471
Subclass: 5.13.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 8.9 +/- 11.2 Average RMSD (Å) : 0.983 +/- 0.354 Consensus geometry
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Consensus Sequence: | hXXphXpXp |
(φψ)-conformation: | bbpppabaa |
Pattern: | x | x | [aipvy] | [aers] | [fkl] | [dhny] | [fgpv] | [ADGRT] | [DNST] | x | [EKQT] | [DERST] | [AILT] | [filv] | [aes] |
Conservation: | -1.000 | -0.404 | -1.006 | -0.512 | -0.221 | -0.302 | -1.808 | -0.460 | 1.533 | -0.814 | 1.830 | 0.556 | 0.978 | 0.071 | 0.560 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1dbt_A_7 | 1dbt | A | 7 | 20 | .IIALDFASAEETLA | .EEE---SSHHHHHH | .xxxxxbabaaaaaa |
1dqw_A_32 | 1dqw | A | 32 | 46 | LCASLDVRTTKELLE | EEEE---SSHHHHHH | xbxbbxxabaaaaaa |
1i7q_A_9 | 1i7q | A | 12 | 26 | KVQASYRGDPTTLFH | EEEE---S-HHHHHH | bbpbxxbabaaaaaa |
1ift_*_89 | 1ift | - | 89 | 103 | SAYFFHPDNQEDAEA | EEEE---SSHHHHHH | bbbbxpxabaaaaaa |
1nb0_A_101 | 1nb0 | A | 110 | 124 | LRPEKNFDSLESLIS | EE-----SSHHHHHH | abwxbxbabaaaaaa |
1vgv_A_322 | 1vgv | A | 322 | 334 | ..VRLVGTDKQRIVE | ..EE---SSHHHHHH | ..bbxxxaxaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1dbt_A_7 | 1dbt | A | U5PURIDINE-5'-MONOPHOSPHATE | A - 9 |
1dbt_A_7 | 1dbt | A | U5PURIDINE-5'-MONOPHOSPHATE | D - 11 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | V - 322 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | R - 323 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | L - 324 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | V - 325 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | G - 326 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | T - 327 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | I - 332 |
1vgv_A_322 | 1vgv | A | MSESELENOMETHIONINE | L - 339 |
Clusters included in this Subclass |
CLUSTER: EH.6.48 |