Information on SUBCLASS 5.17.1 |
Subclass Accession number: 7477
Subclass: 5.17.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 66.7 +/- 10.4 Average RMSD (Å) : 0.425 +/- 0.126 Consensus geometry
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Consensus Sequence: | hWHpQXPXW |
(φψ)-conformation: | bbablbpaa |
Pattern: | x | [IMV] | [R] | [G] | [H] | [T] | [L] | [AIV] | [W] | [H] | [NS] | [Q] | x | [P] | [GS] | [W] | [LMV] | [QST] |
Conservation: | -1.052 | -0.685 | 0.078 | 0.390 | 1.016 | 0.078 | -0.235 | -0.923 | 1.953 | 1.016 | -0.582 | 0.078 | -1.321 | 0.703 | -0.710 | 1.953 | -0.759 | -0.997 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b31_A_80 | 1b31 | A | 80 | 97 | LIRGHTLVWHSQLPGWVS | EEEEEEEE-SSS--HHHH | xbbxbwabbaxlbwaaaa |
1i1w_A_79 | 1i1w | A | 79 | 96 | LIRGHTLVWHSQLPSWVS | EEEEEEEE-STT--HHHH | xbbxbwabbaxlbpaaaa |
1od8_A_77 | 1od8 | A | 77 | 94 | QVRGHTLAWHSQQPGWMQ | EEEEEEEE-SSS--HHHH | xbxxbwabbablxxaaaa |
1xyz_A_592 | 1xyz | A | 592 | 609 | QMRGHTLIWHNQNPSWLT | EEEEEEEE-SSS--HHHH | xbbxbwabbablbxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | H - 83 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | T - 84 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | W - 87 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | S - 89 |
1i1w_A_79 | 1i1w | A | GOLGLYCEROL | Q - 90 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | H - 81 |
1od8_A_77 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | H - 81 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | T - 82 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | W - 85 |
1od8_A_77 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | W - 85 |
1od8_A_77 | 1od8 | A | IMDIMIDAZOLE | W - 85 |
1od8_A_77 | 1od8 | A | XDLXYLOSE-DERIVED ISOFAGOMINE LACTAM | Q - 88 |
1od8_A_77 | 1od8 | A | XYPBETA-D-XYLOPYRANOSE | Q - 88 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1od8_A_77 | 1od8 | A | AC9XDL BINDING SITE FOR CHAIN A | H - 81 |
1od8_A_77 | 1od8 | A | AC9XDL BINDING SITE FOR CHAIN A | W - 85 |
Clusters included in this Subclass |
CLUSTER: EH.5.140 |