Information on SUBCLASS 5.24.1 |
Subclass Accession number: 748
Subclass: 5.24.1 Type: HA beta-beta hairpin DB: ArchDB40 Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 16.7 +/- 17.1 Average RMSD (Å) : 0.850 +/- 0.420 Consensus geometry
|
Consensus Sequence: | XXXXpPhph |
(φψ)-conformation: | bbapbwpbb |
Pattern: | [ACIW] | [ACTV] | [DTV] | x | [EGS] | x | [P] | [AIP] | x | [CGI] | x | [CKT] |
Conservation: | -0.400 | -0.064 | -0.255 | -0.534 | 0.059 | -0.534 | 3.091 | -0.174 | -0.467 | -0.515 | -0.335 | 0.130 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1c2a_A_72 | 1c2a | A | 73 | 84 | ICTRSNPPTCRC | EE-SSSS-EEEE | bbxaxbwxbbbb |
1fec_A_363 | 1fec | A | 363 | 374 | CAVFSIPPMGVC | EEE--SS-EEEE | bbbaxbwxbbbb |
1fmk_*_325 | 1fmk | - | 327 | 338 | AVVSEEPIYIVT | EEE-SSS-EEEE | bbbapbbxbbbb |
1ijq_A_509 | 1ijq | A | 512 | 523 | WTDWGTPAKIKK | EEE-SSS-EEEE | bxbaxbwxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1fec_A_363 | 1fec | A | FADFLAVIN-ADENINE DINUCLEOTIDE | A - 364 |
1fec_A_363 | 1fec | A | FADFLAVIN-ADENINE DINUCLEOTIDE | F - 366 |
Clusters included in this Subclass |
CLUSTER: HA.6.86 |