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Information on SUBCLASS 5.20.1
Subclass Accession number: 7481
Subclass: 5.20.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 7

Average sequence ID (%) : 48.6 +/- 24.4
Average RMSD (Å) : 0.314 +/- 0.107

Consensus geometry
d (Å): 11 delta (°): 0-45 theta (°): 135-180 rho (°): 90-135
Consensus Sequence: hhTGhXXGh
(φψ)-conformation: bbplaabea
Pattern: [CIV][ACV][ILV][ILV][T][G][ACS][GS][AGRST][G][FIL][G][kr][aes][ILMY][A][ilmpv][AEQRT][FL][AG]
Conservation:-0.220-0.666-0.0640.1011.2831.836-0.368-0.138-1.2001.836-0.2931.836-0.550-0.984-0.5570.730-1.322-1.083-0.124-0.054
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1fmc_A_131fmc   A1332CAIITGAGAGIGKEIAITFAEEEETTTTSHHHHHHHHHHHbbbbxlaabeaaaaaaaaaa
1g0o_A_311g0o   A3150VALVTGAGRGIGREMAMELGEEEETTTTSHHHHHHHHHHHbbbbxvaabeaaaaaaaaaa
1gee_A_91gee   A928VVVITGSSTGLGKSMAIRFAEEEETT-SSHHHHHHHHHHHxbbbxlaabeaaaaaaaaaa
1gz6_A_111gz6   A1130VVLVTGAGGGLGRAYALAFAEEEETTTTSHHHHHHHHHHHbbbbxvaabeaaaaaaaaaa
1i01_A_71i01   A726IALVTGASRGIGRAIAETLAEEEESS-SSHHHHHHHHHHHbbbbxvaabeaaaaaaaaaa
1jtv_A_31jtv   A423VVLITGCSSGIGLHLAVRLAEEEES--SSHHHHHHHHHHHxbbbxvaabeaaaaaaaaaa
1oaa_*_91oaa   -1029VCVLTGASRGFGRALAPQLAEEEESS-SSHHHHHHHHHHHbbbbxlaabeaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 17
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 18
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 19
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 20
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE A - 21
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 22
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE I - 23
1fmc_A_131fmc   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 24
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 35
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 36
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 37
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 38
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 39
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 40
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE I - 41
1g0o_A_311g0o   A     NDPNADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 42
1gee_A_91gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE T - 13
1gee_A_91gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE G - 14
1gee_A_91gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 15
1gee_A_91gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE S - 16
1gee_A_91gee   A     NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE L - 19
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE T - 15
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 16
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE A - 17
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 18
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 19
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 20
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE L - 21
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE G - 22
1gz6_A_111gz6   A     NAI1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE Y - 25
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE T - 14
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 15
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE A - 16
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE S - 17
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE R - 18
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 19
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE F - 20
1oaa_*_91oaa   *     NAPNADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE G - 21
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1gz6_A_111gz6   A AC6NAI BINDING SITE FOR CHAIN AG - 16
1gz6_A_111gz6   A AC6NAI BINDING SITE FOR CHAIN AG - 19
1gz6_A_111gz6   A AC6NAI BINDING SITE FOR CHAIN AG - 20
1gz6_A_111gz6   A AC6NAI BINDING SITE FOR CHAIN AL - 21

Clusters included in this Subclass
CLUSTER: EH.4.76