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Information on SUBCLASS 5.23.2
Subclass Accession number: 7485
Subclass: 5.23.2 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 5.8 +/- 6.8
Average RMSD (Å) : 1.067 +/- 0.208

Consensus geometry
d (Å): 13 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: XhXXXXpXX
(φψ)-conformation: bbpppapaa
Pattern: x[VY]x[CLW]xx[ADN]x[DEN][KPR][CKY]x[ERT]xxx[GKV][CKQ][DNV]x[AE][AIK][AL]
Conservation:0.0031.501-0.1470.7510.003-0.4470.152-0.8962.0990.901-0.297-1.7940.3020.404-1.495-0.896-1.1950.003-0.447-0.2971.655-0.8961.031
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1kbi_A_2491kbi   A250272WYQLYVNSDRKITDDLVKNVEKLEEEE---SSHHHHHHHHHHHHHHbbxbbxxaxaaaaaaaaaaaaaa
1le6_A_731le6   A7395SVLCGPAENKCQELLCKCDQEIAEEEE---SSHHHHHHHHHHHHHHbxbxxpxabaaaaaaaaaaaaaa
1qnf_*_951qnf   -95117AVYWNQDIEPYGRDRDGQVAAALEEEEE---SHHHHHHHHHHHHHHbbbbxxbaxaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1kbi_A_2491kbi   A     FMNFLAVIN MONONUCLEOTIDE Q - 252
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL L - 253
1kbi_A_2491kbi   A     FMNFLAVIN MONONUCLEOTIDE Y - 254
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL V - 255
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL R - 259
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL T - 262
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL D - 263
1kbi_A_2491kbi   A     MPD2-METHYL-2,4-PENTANEDIOL V - 266
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE D - 101
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE E - 103
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE P - 104
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE Y - 105
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE G - 106
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE R - 107
1qnf_*_951qnf   *     HDF8-HYDROXY-10-(D-RIBO-2,3,4,5-TETRAHYDROXYPENTYL)-5-DEAZAISOALLOXAZINE R - 109

Clusters included in this Subclass
CLUSTER: EH.4.133