Information on SUBCLASS 6.18.1 |
Subclass Accession number: 7543
Subclass: 6.18.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 15.5 +/- 21.9 Average RMSD (Å) : 1.325 +/- 0.618 Consensus geometry
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Consensus Sequence: | hXXXhXXphX |
(φψ)-conformation: | bbpbppapaa |
Pattern: | [HKY] | [CLV] | [FIV] | [GKM] | x | x | x | x | [GKR] | [DNR] | [MPW] | [AQ] | [DQSY] | x |
Conservation: | 1.427 | 1.143 | 1.445 | -0.941 | -0.732 | -1.174 | -0.575 | -0.727 | 0.103 | 0.962 | -0.332 | 1.151 | -0.816 | -0.935 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1k28_A_204 | 1k28 | A | 204 | 217 | HLIMKQPVRDMAQI | EES-SS----HHHH | bxabxbxxapaaaa |
1o7q_A_182 | 1o7q | A | 185 | 198 | KVFKIKPEKRWQDI | EEEE----SSHHHH | bbbxbxxxaxaaaa |
2aaa_*_226 | 2aaa | - | 226 | 239 | YCVGEIDNGNPASD | EEEE----S-HHHH | pbbxxbxbabaaaa |
7taa_*_226 | 7taa | - | 226 | 239 | YCIGEVLDGDPAYT | EEEE----S-HHHH | pbbxxbxbaxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | E - 192 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | R - 194 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | W - 195 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | Q - 196 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | D - 197 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | I - 198 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | S - 199 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | M - 200 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | M - 201 |
1o7q_A_182 | 1o7q | A | MNMANGANESE (II) ION | R - 202 |
1o7q_A_182 | 1o7q | A | UDPURIDINE-5'-DIPHOSPHATE | R - 202 |
2aaa_*_226 | 2aaa | * | CACALCIUM ION | E - 230 |
2aaa_*_226 | 2aaa | * | CACALCIUM ION | D - 232 |
7taa_*_226 | 7taa | * | ABCMODIFIED ACARBOSE HEXASACCHARIDE | E - 230 |
7taa_*_226 | 7taa | * | ABCMODIFIED ACARBOSE HEXASACCHARIDE | L - 232 |
7taa_*_226 | 7taa | * | ABCMODIFIED ACARBOSE HEXASACCHARIDE | D - 233 |
7taa_*_226 | 7taa | * | ABCMODIFIED ACARBOSE HEXASACCHARIDE | G - 234 |
7taa_*_226 | 7taa | * | ABCMODIFIED ACARBOSE HEXASACCHARIDE | D - 235 |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1o7q_A_182 | 1o7q | A | AC7UDP BINDING SITE FOR CHAIN A | R - 194 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | W - 195 |
1o7q_A_182 | 1o7q | A | AC7UDP BINDING SITE FOR CHAIN A | D - 197 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | I - 198 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | S - 199 |
1o7q_A_182 | 1o7q | A | AC6UDP BINDING SITE FOR CHAIN A | R - 202 |
Clusters included in this Subclass |
CLUSTER: EH.7.66 |