Logo
Information on SUBCLASS 6.39.1
Subclass Accession number: 7564
Subclass: 6.39.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 35.2 +/- 19.4
Average RMSD (Å) : 0.500 +/- 0.173

Consensus geometry
d (Å): 9 delta (°): 45-90 theta (°): 135-180 rho (°): 135-180
Consensus Sequence: hDhhhGpcXp
(φψ)-conformation: bbabaealaa
Pattern: x[V][LV][D][CIV][AF][CGM][G][ST][GN][TV][DT][AGS][IL][MV][AL]x[EKR]
Conservation:-0.9270.926-0.0242.284-0.356-0.560-1.3372.2840.0560.383-0.145-0.248-0.5830.2930.056-0.711-1.186-0.205
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1boo_A_2681boo   A268285LVVDIFGGSNTTGLVAEREEEETT-TT-HHHHHHHHxbbbabaeavaaaaaaaa
1g60_A_2151g60   A215232LVLDCFMGSGTTAIVAKKEEEESS-TT-HHHHHHHHbbbbabaeavaaaaaaaa
1xva_A_591xva   A5976RVLDVACGTGVDSIMLVEEEEESS-TTSHHHHHHHHxbbxabaeavaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE D - 271
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE I - 272
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE F - 273
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 274
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE G - 275
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE S - 276
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE N - 277
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 278
1boo_A_2681boo   A     SAHS-ADENOSYL-L-HOMOCYSTEINE T - 279
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE D - 218
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE C - 219
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE F - 220
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE M - 221
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE G - 222
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE S - 223
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE G - 224
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE T - 225
1g60_A_2151g60   A     SAMS-ADENOSYLMETHIONINE T - 226
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE D - 62
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE A - 64
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE C - 65
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE G - 66
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE T - 67
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE G - 68
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE V - 69
1xva_A_591xva   A     SAMS-ADENOSYLMETHIONINE D - 70

Clusters included in this Subclass
CLUSTER: EH.5.224