ArchDB - Biological DataBase of Protein Loops

Information on SUBCLASS 9.6.1

Subclass Accession number: 7638
Subclass: 9.6.1

Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates:

Consensus coordinates:

Number of loops: 4

Average sequence ID (%) : 42.2 +/- 23.8
Average RMSD (Å) : 0.425 +/- 0.171

Consensus geometry

d (Å): 11

delta (°): 45-90

theta (°): 135-180

rho (°): 315-360

Consensus Sequence:	hhPYXYpXpXhXc
(φψ)-conformation:	bbwwaabapppaa

Pattern:	[LM]	[ILM]	[ILM]	[FY]	[P]	[Y]	[GS]	[Y]	[ADKT]	[CTY]	[KQT]	x	[GILP]	[DEP]	[DN]	x	[ADT]	[E]	[L]	[NS]	[AEQS]	[LV]	[A]	[KQ]	[AGKS]	[AT]	[AV]	[AKQ]	[AES]	[L]	[AKS]	[RS]	[L]	[HY]
Conservation:	0.213	-0.088	-0.093	1.169	2.183	2.183	-0.076	2.183	-1.193	-0.815	-0.672	-1.196	-1.680	-0.403	0.383	-1.291	-0.949	1.144	0.624	0.347	-0.804	-0.144	0.624	0.195	-0.966	-0.220	-0.325	-0.721	-0.699	0.624	-0.702	-0.497	0.624	1.037

Loops included in this Subclass

Loop	PDB	Chain	Start	End	Sequence	Sec Struct	Ramachandran
1dtd_A_557	1dtd	A	557	590	LLMFPYGYKCTKLDDFDELSEVAQKAAQSLSRLH	EEEES-SS--S--TTHHHHHHHHHHHHHHHHHHH	bbbbwpaabaxxxaaaaaaaaaaaaaaaaaaaaa
1kwm_A_201	1kwm	A	201	234	MMIYPYSYAYKLGENNAELNALAKATVKELASLH	EEEES-SSSS---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabxbbxaaaaaaaaaaaaaaaaaaaaa
1m4l_A_201	1m4l	A	201	234	LLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLY	EEEES-SS-S---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabapxxaaaaaaaaaaaaaaaaaaaaa
1nsa_*_201	1nsa	-	201	234	MILYPYSYDYKLPENDAELNSLAKGAVKELASLY	EEEES-SS-S---TTHHHHHHHHHHHHHHHHHHH	bbbbwwaabaxxxaaaaaaaaaaaaaaaaaaaaa

PDB ligands within a cut-off distance of 6 Å in this subclass

Loop	PDB	Chain	Ligands	Residue
1dtd_A_557	1dtd	A	GLUGLUTAMIC ACID	M - 559

Clusters included in this Subclass