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Information on SUBCLASS 6.3.2
Subclass Accession number: 767
Subclass: 6.3.2 PSSM
Type: HA beta-beta hairpin
DB: ArchDB40

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 10

Average sequence ID (%) : 7.4 +/- 10.9
Average RMSD (Å) : 1.030 +/- 0.258

Consensus geometry
d (Å): 5 delta (°): 90-135 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XpXpXXXhXh
(φψ)-conformation: bbaababpbb
Pattern: xx[hknswy][dnrst]x[EKRSTW][adgknt][deknpt]x[fgmpvy]x[filmtv]
Conservation:-1.000-1.000-0.1420.436-1.9851.152-0.0020.559-0.045-0.728-0.7171.471
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cv8_*_1351cv8   -138149IIWNPWDNGFMTEEE-TT-SS-EExbbxaababbbb
1eej_A_521eej   A5261..YDVSGTAPVN..EE-SSSS-EE..bbaababxbx
1eje_A_1131eje   A113124WTSSRRVKPPRIEE--SSSSS-EEbbxxaabapxbx
1fwx_A_4121fwx   A415426QLIDISGDKMVLEEEE-SSSS-EExxbxaababxbx
1h5z_A_4281h5z   A428437..NDHSKMVVQL..EE-SSSS-EE..xbaabaxxbx
1hyo_A_191hyo   A2132VFSTQSNPKPRIEEE-SS--S-EEbbbbaabaxwbx
1j0p_A_91j0p   A919.LKMDKTKQPVV.EEE-SSSS-EE.xxxaababxbx
1lfk_A_3811lfk   A381391.EFRLTTPAYGL.EEE-SSSB-EE.xxxaababxbb
1n9e_A_1221n9e   A126137VVYFGEGEEGYFEEEE-SSSS-EEbbxbaaxabxbx
1nt4_A_3191nt4   A324335RWHDSKANRDLMEEEETTTTEEEExbbxaaxabbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cv8_*_1351cv8   *     E64N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE W - 143
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE L - 9
1j0p_A_91j0p   A     EOHETHANOL L - 9
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 10
1j0p_A_91j0p   A     EOHETHANOL K - 10
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE M - 11
1j0p_A_91j0p   A     EOHETHANOL M - 11
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE D - 12
1j0p_A_91j0p   A     EOHETHANOL D - 12
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 13
1j0p_A_91j0p   A     EOHETHANOL K - 13
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE T - 14
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE K - 15
1j0p_A_91j0p   A     EOHETHANOL K - 15
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE Q - 16
1j0p_A_91j0p   A     EOHETHANOL Q - 16
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE P - 17
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 18
1j0p_A_91j0p   A     EOHETHANOL V - 18
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE V - 19
1j0p_A_91j0p   A     EOHETHANOL V - 19
1j0p_A_91j0p   A     HEMPROTOPORPHYRIN IX CONTAINING FE F - 20
1j0p_A_91j0p   A     EOHETHANOL F - 20
1n9e_A_1221n9e   A     NAGN-ACETYL-D-GLUCOSAMINE N - 122
1n9e_A_1221n9e   A     NAGN-ACETYL-D-GLUCOSAMINE E - 131
1n9e_A_1221n9e   A     NAGN-ACETYL-D-GLUCOSAMINE K - 141
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1cv8_*_1351cv8   * NULCATALYTIC TRIAD.N - 141

Clusters included in this Subclass
CLUSTER: HA.5.114
CLUSTER: HA.6.72
CLUSTER: HA.7.22