Information on SUBCLASS 11.12.1 |
Subclass Accession number: 7671
Subclass: 11.12.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 35.1 +/- 23.6 Average RMSD (Å) : 0.700 +/- 0.200 Consensus geometry
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Consensus Sequence: | hhXhhXXpcPGXpRX |
(φψ)-conformation: | bpapbppppplppaa |
Pattern: | [MVW] | [AV] | [LV] | [IL] | [ITV] | [AG] | [AG] | [KPR] | [PR] | [QR] | [GK] | [P] | [G] | [MQ] | [ES] | [R] | [AKL] | [ADE] | [L] | [LV] | [DEG] | [AI] | [NT] | [AGV] | [NQ] | [I] | [FL] | [AKT] | [ADV] | x | [GM] | [KP] | [AN] | [IL] | [DNV] | [AK] | [V] |
Conservation: | -0.620 | -0.279 | 0.065 | 0.409 | -0.386 | 0.180 | -0.021 | -0.542 | -0.149 | 0.423 | -0.379 | 3.204 | 2.501 | 0.079 | -0.049 | 1.799 | -1.322 | -0.698 | 1.097 | 0.065 | -0.542 | -0.503 | 0.309 | -1.088 | 0.208 | 1.097 | 0.180 | -0.932 | -1.401 | -1.081 | -0.723 | -0.007 | -0.709 | 0.457 | -1.244 | -0.494 | 1.097 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b8p_A_86 | 1b8p | A | 86 | 122 | VALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAV | EEEE-------TT--HHHHHHHHHHHHHHHHHHHHHH | bbbxaxbxxxxxvxxaaaaaaaaaaaaaaaaaaaaaa |
1lld_A_78 | 1lld | A | 78 | 114 | MVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKV | EEEE-------TT--HHHHHHHHHHHHHHHHHHHHHH | bbbxaxbxxxbxlxxaaaaaaaaaaaaaaaaaaaaaa |
7mdh_A_125 | 7mdh | A | 125 | 161 | WALLIGAKPRGPGMERAALLDINGQIFADQGKALNAV | EEEE-------TT--HHHHHHHHHHHHHHHHHHHHHH | bbxxapbxxpxxlbxaaaaaaaaaaaaaaaaaaaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | T - 82 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 83 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | G - 84 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | P - 85 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | R - 86 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | Q - 87 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 103 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | A - 106 |
1lld_A_78 | 1lld | A | NADNICOTINAMIDE-ADENINE-DINUCLEOTIDE | I - 107 |
Clusters included in this Subclass |
CLUSTER: EH.10.20 |