Information on SUBCLASS 12.3.1 |
Subclass Accession number: 7676
Subclass: 12.3.1 Type: EH beta-alpha DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 6 Average sequence ID (%) : 41.3 +/- 27.1 Average RMSD (Å) : 0.483 +/- 0.075 Consensus geometry
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Consensus Sequence: | IpXNXpLChXpphXWp |
(φψ)-conformation: | bblbaapblaaappaa |
Pattern: | [gl] | [AIV] | [LY] | [I] | [EHQRS] | [agkr] | [N] | [dprt] | [HKQ] | [L] | [C] | [FHY] | x | [DH] | [mt] | [ILV] | x | [W] | [DKRT] | [DKQ] | [ILV] |
Conservation: | -0.968 | -0.303 | -0.229 | 0.410 | -0.581 | -0.802 | 1.112 | -0.936 | -0.240 | 0.410 | 2.164 | 0.290 | -0.774 | 0.077 | -0.371 | -0.014 | -1.059 | 2.865 | -0.692 | -0.332 | -0.028 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1m6b_A_127 | 1m6b | A | 127 | 147 | GVYIEKNDKLCHMDTIDWRDI | EEEEE--TT--STTTS-HHHH | xbbbbvxaaxbgaaaxxaaaa |
1m6b_A_434 | 1m6b | A | 434 | 454 | RIYISANRQLCYHHSLNWTKV | EEEEE--TT--S-SS--HHHH | bbbbbvxaaxbvaaapxaaaa |
1n8y_C_131 | 1n8y | C | 131 | 151 | GVLIRGNPQLCYQDMVLWKDV | EEEEES-TT--STTSS-HHHH | bbbbbvbaaxbvaaaxxaaaa |
1n8y_C_444 | 1n8y | C | 444 | 464 | LALIHRNAHLCFVHTVPWDQL | EEEEE--TT---STTS-HHHH | xbbbblbaaxblaaaxwaaaa |
1n8z_C_130 | 1n8z | C | 130 | 150 | GVLIQRNPQLCYQDTILWKDI | EEEEES-TT--STTTS-HHHH | bbbbblbaaxbvaaaxxaaaa |
1n8z_C_443 | 1n8z | C | 443 | 463 | LALIHHNTHLCFVHTVPWDQL | EEEEE--TT---STTS-HHHH | bbbbblbaaxxlaaaxxaaaa |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1m6b_A_434 | 1m6b | A | NAGN-ACETYL-D-GLUCOSAMINE | Q - 442 |
1m6b_A_434 | 1m6b | A | NAGN-ACETYL-D-GLUCOSAMINE | N - 450 |
1m6b_A_434 | 1m6b | A | NAGN-ACETYL-D-GLUCOSAMINE | T - 452 |
1m6b_A_434 | 1m6b | A | NAGN-ACETYL-D-GLUCOSAMINE | K - 453 |
1n8y_C_131 | 1n8y | C | NAGN-ACETYL-D-GLUCOSAMINE | R - 135 |
1n8y_C_131 | 1n8y | C | NAGN-ACETYL-D-GLUCOSAMINE | G - 136 |
Clusters included in this Subclass |
CLUSTER: EH.11.2 |