Logo
Information on SUBCLASS 12.5.1
Subclass Accession number: 7678
Subclass: 12.5.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 4

Average sequence ID (%) : 76.7 +/- 1.0
Average RMSD (Å) : 0.475 +/- 0.171

Consensus geometry
d (Å): 13 delta (°): 90-135 theta (°): 135-180 rho (°): 180-225
Consensus Sequence: hYPXcKKSXcGKLRLL
(φψ)-conformation: bbppbaabaaeappaa
Pattern: xxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Conservation:-0.1960.188-2.0191.3931.393-1.398-0.4550.3340.334-0.196-0.948-1.3140.8630.334-0.1960.334-0.196-0.1961.3930.3342.451-1.4781.3930.334-0.9870.182-0.455-0.8370.334-0.721
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1bk4_A_2611bk4   A261290IFLYPANKKSPDGKLRLLYECNPMAFIMEKEEEE---SS-TT-SSBTTTTHHHHHHHHHHbbbbxxbaabaaeaxxaaaIaaaaaaaaaa
1dcu_A_2861dcu   A286315IYGYPRDKKSKNGKLRLLYECAPMSFIVEQEEEE---SSSTT-SSBTTTTHHHHHHHHHHbbbbxxbaabaaeaxxaaaaaaaaaaaaaa
1lev_A_2611lev   A261290IFMYPANKKSPKGKLRLLYECNPMAYVMEKEEEE---SS-TT-SSBTTTTHHHHHHHHHHbbbbwxbaabaaeaxxaaaaaaaaaaaaaa
1nuw_A_12611nuw   A12611290IFMYPANKKSPKGKLRLLYECNPMAYVMEKEEEE--BTTBTT-SSBTTTTHHHHHHHHHHbbbbwxbaabaaeaxxaaaaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1bk4_A_2611bk4   A     MGMAGNESIUM ION R - 276
1bk4_A_2611bk4   A     MGMAGNESIUM ION Y - 279
1bk4_A_2611bk4   A     MGMAGNESIUM ION E - 280
1lev_A_2611lev   A     F6PFRUCTOSE-6-PHOSPHATE F - 262
1lev_A_2611lev   A     F6PFRUCTOSE-6-PHOSPHATE Y - 264
1lev_A_2611lev   A     F6PFRUCTOSE-6-PHOSPHATE K - 269
1lev_A_2611lev   A     F6PFRUCTOSE-6-PHOSPHATE K - 274
1lev_A_2611lev   A     F6PFRUCTOSE-6-PHOSPHATE L - 275
1lev_A_2611lev   A     MNMANGANESE (II) ION R - 276
1lev_A_2611lev   A     MNMANGANESE (II) ION Y - 279
1lev_A_2611lev   A     F6PFRUCTOSE-6-PHOSPHATE E - 280
1lev_A_2611lev   A     MNMANGANESE (II) ION E - 280
1nuw_A_12611nuw   A     F6PFRUCTOSE-6-PHOSPHATE F - 1262
1nuw_A_12611nuw   A     F6PFRUCTOSE-6-PHOSPHATE Y - 1264
1nuw_A_12611nuw   A     F6PFRUCTOSE-6-PHOSPHATE K - 1274
1nuw_A_12611nuw   A     PO3PHOSPHITE ION K - 1274
1nuw_A_12611nuw   A     F6PFRUCTOSE-6-PHOSPHATE L - 1275
1nuw_A_12611nuw   A     F6PFRUCTOSE-6-PHOSPHATE R - 1276
1nuw_A_12611nuw   A     PO3PHOSPHITE ION R - 1276
1nuw_A_12611nuw   A     MGMAGNESIUM ION R - 1276
1nuw_A_12611nuw   A     MGMAGNESIUM ION Y - 1279
1nuw_A_12611nuw   A     F6PFRUCTOSE-6-PHOSPHATE E - 1280
1nuw_A_12611nuw   A     PO3PHOSPHITE ION E - 1280
1nuw_A_12611nuw   A     MGMAGNESIUM ION E - 1280
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1bk4_A_2611bk4   A MGTHE MG2+ BINDING SITE IS NEAR THE CATALYTIC CLEFT OF THE EN A SULFATE (SO4 328) BINDS AT THE PHOSPHATE BINDING SITE OFE - 280

Clusters included in this Subclass
CLUSTER: EH.15.5