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Information on SUBCLASS 16.8.1
Subclass Accession number: 7709
Subclass: 16.8.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 34.4 +/- 0.0
Average RMSD (Å) : 0.800 +/- 0.000

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 90-135 rho (°): 180-225
Consensus Sequence: ADDLGhcDhGhpGpXXpTXX
(φψ)-conformation: pblppaaapaaagpa_pbaa
Pattern: [HN][IL][V][FL][IL][FL][A][D][D][L][G][WY][GN][D][LV][G][CF][HY][G][HS][PR]x[RS][T][PT][HP]xx[AD]x[AL][A]
Conservation:0.347-0.2300.347-0.519-0.230-0.5190.3471.5021.5020.3471.5021.213-0.2301.502-0.5191.502-0.3740.7801.502-0.519-0.807-1.385-0.9520.925-0.519-0.374-1.385-1.674-1.096-1.241-1.0960.347
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1auk_*_221auk   -2253NIVLIFADDLGYGDLGCYGHPSSTTPNLDQLAEEEEEEESS--TTTSGGGT-SS---HHHHHHHxbbbxbxblbxaaaxaaagpaapbaaaaaaaa
1fsu_*_461fsu   -4677HLVFLLADDLGWNDVGFHGSRIRTPHLDALAAEEEEEEESS--TTSSGGGT-SS--HHHHHHHHxbbbbbxbvxxaaabaaavxaxxbaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1auk_*_221auk   *     FGL2-AMINOPROPANEDIOIC ACID F - 27
1auk_*_221auk   *     MGMAGNESIUM ION A - 28
1auk_*_221auk   *     FGL2-AMINOPROPANEDIOIC ACID D - 29
1auk_*_221auk   *     MGMAGNESIUM ION D - 29
1auk_*_221auk   *     FGL2-AMINOPROPANEDIOIC ACID D - 30
1auk_*_221auk   *     MGMAGNESIUM ION D - 30
1fsu_*_461fsu   *     CACALCIUM ION A - 52
1fsu_*_461fsu   *     ALS2-AMINO-3-OXO-4-SULFO-BUTYRIC ACID D - 53
1fsu_*_461fsu   *     CACALCIUM ION D - 53
1fsu_*_461fsu   *     ALS2-AMINO-3-OXO-4-SULFO-BUTYRIC ACID D - 54
1fsu_*_461fsu   *     CACALCIUM ION D - 54
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1fsu_*_461fsu   * MEBTHIS IS THE METAL BINDING SITE. THE METAL WAS IDENTIFIED AS CALCIUM BY ITS PEAK HEIGHT IN DIFFERENCE ELECTRON DENSITY MAPS, BY SUCCESSIVE TEMPERATURE FACTOR REFINEMENT AND BY THE NATURE AND GEOMETRY OF THE COORDINATING LIGANDS.D - 53
1fsu_*_461fsu   * MEBTHIS IS THE METAL BINDING SITE. THE METAL WAS IDENTIFIED AS CALCIUM BY ITS PEAK HEIGHT IN DIFFERENCE ELECTRON DENSITY MAPS, BY SUCCESSIVE TEMPERATURE FACTOR REFINEMENT AND BY THE NATURE AND GEOMETRY OF THE COORDINATING LIGANDS.D - 54

Clusters included in this Subclass
CLUSTER: EH.17.12