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Information on SUBCLASS 28.1.1
Subclass Accession number: 7723
Subclass: 28.1.1 PSSM
Type: EH beta-alpha
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 3

Average sequence ID (%) : 63.4 +/- -12.7
Average RMSD (Å) : 0.267 +/- 0.058

Consensus geometry
d (Å): 15 delta (°): 90-135 theta (°): 45-90 rho (°): 315-360
Consensus Sequence: INSRhWCpDGpTPGXpNhCcIXCSXLLppDhT
(φψ)-conformation: ppaaaabpalabplpalaalbpaaaaapapaa
Pattern: [I][N][S][R][WY][W][C][DHN][D][G][KR][T][P][G][AS][KR][N][ALV][C][GN][I][PRS][C][S][AKQ][L][L][DST][DS][D][IL][T][ADV][ADS][ILV][KNR][C][A][K][KR][IV]
Conservation:-0.1890.624-0.1890.2180.3282.6581.845-0.8220.6240.624-0.3730.2181.0310.624-0.787-0.3770.624-1.2741.845-0.572-0.189-1.4551.845-0.189-1.274-0.189-0.189-1.138-0.7090.624-0.5880.218-1.635-1.274-0.731-0.9121.845-0.1890.218-0.380-0.388
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1jug_*_581jug   -5898INSRYWCHDGKTPGSKNACNISCSKLLDDDITDDLKCAKKIEETTTT-B-SS-TT---TT-SBGGGGSSS--HHHHHHHHHHxxaaaabbavNbxvxalaavbxaaaaaxabaaaaaaaaaaa
1lmq_*_581lmq   -5898INSRYWCDDGRTPGAKNVCGIRCSQLLTDDLTVAIRCAKRVEETTTS-B-S--TT---TT-SBGGGGSSSS-HHHHHHHHHHxxaaaabxavabxvxalaavbxaaaaaxaxaaaaaaaaaaa
3lzt_*_583lzt   -5898INSRWWCNDGRTPGSRNLCNIPCSALLSSDITASVNCAKKIEETTTT-B-S--TT---TT-SBGGGGG-SS-HHHHHHHHHHxxaaaabxavabxvxalaalbxaaaaaxaxaaaaaaaaaaa
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1jug_*_581jug   *     CACALCIUM ION K - 82
1jug_*_581jug   *     CACALCIUM ION L - 83
1jug_*_581jug   *     CACALCIUM ION L - 84
1jug_*_581jug   *     CACALCIUM ION D - 85
1jug_*_581jug   *     CACALCIUM ION D - 86
1jug_*_581jug   *     CACALCIUM ION D - 87
1jug_*_581jug   *     CACALCIUM ION I - 88
1jug_*_581jug   *     CACALCIUM ION T - 89
1jug_*_581jug   *     CACALCIUM ION D - 90
1jug_*_581jug   *     CACALCIUM ION D - 91
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE I - 58
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE N - 59
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE S - 60
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE R - 61
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE Y - 62
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE W - 63
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE K - 73
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE V - 75
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE R - 97
1lmq_*_581lmq   *     NAGN-ACETYL-D-GLUCOSAMINE V - 98
3lzt_*_583lzt   *     ACTACETATE ION I - 58
3lzt_*_583lzt   *     ACTACETATE ION N - 59
3lzt_*_583lzt   *     ACTACETATE ION S - 60
3lzt_*_583lzt   *     ACTACETATE ION W - 63
3lzt_*_583lzt   *     ACTACETATE ION K - 96
3lzt_*_583lzt   *     ACTACETATE ION I - 98
3lzt_*_583lzt   *     ACTACETATE ION S - 100
PDB Site Annotated loops in this subclass
LoopPDBChainSiteResidue
1jug_*_581jug   * CABCA BINDING SITE.K - 82
1jug_*_581jug   * CABCA BINDING SITE.D - 85
1jug_*_581jug   * CABCA BINDING SITE.D - 87
1jug_*_581jug   * CABCA BINDING SITE.D - 90
1jug_*_581jug   * CABCA BINDING SITE.D - 91

Clusters included in this Subclass
CLUSTER: EH.28.1