Information on SUBCLASS 2.2.3 |
Subclass Accession number: 7737
Subclass: 2.2.3 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 82 Average sequence ID (%) : 9.6 +/- 13.3 Average RMSD (Å) : 0.404 +/- 0.161 Consensus geometry
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Consensus Sequence: | XXXpXX |
(φψ)-conformation: | bbaabb |
Pattern: | x | x | x | [acdgnst] | [dehknpqrst] | [dehknqrsty] | x | [acfgiklmtv] | x |
Conservation: | 0.360 | -1.503 | -1.300 | 0.333 | 1.221 | 0.743 | -1.010 | 0.775 | 0.383 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1a41_*_153 | 1a41 | - | 153 | 161 | IEISPDEIV | EEEETTEEE | xpbbaabbb |
1a6f_*_24 | 1a6f | - | 25 | 33 | SVANRQFVL | EEE-SSEEE | bbbbaabbb |
1a6q_*_129 | 1a6q | - | 132 | 140 | VLISPQHTY | EEE-SSEEE | bbbbaabbb |
1a7t_A_5 | 1a7t | A | 5 | 13 | VKISDDISI | EE-SSSEEE | bxabaabbb |
1ao0_A_156 | 1ao0 | A | 161 | 169 | LIMTETEMI | EEE-SSEEE | bbbbaabbb |
1apm_E_106 | 1apm | E | 109 | 117 | SFKDNSNLY | EEE-SSEEE | bbbbaabbb |
1apm_E_43 | 1apm | E | 49 | 57 | LGTGSFGRV | EEE-SSEEE | abbbaabbb |
1boo_A_23 | 1boo | A | 23 | 30 | .YTTSNGSM | .EE-SSEEE | .bbbaabbb |
1bqy_A_39 | 1bqy | A | 45 | 53 | TLINQDWVV | EE-SSSEEE | bxabaabbb |
1btk_A_25 | 1btk | A | 30 | 38 | FLLTVHKLS | EEE-SSEEE | bbbbaabbb |
1bu6_O_5 | 1bu6 | O | 9 | 17 | LDQGTTSSR | EEE-SSEEE | xbxxaabbb |
1cer_O_57 | 1cer | O | 57 | 65 | VAYDDQYLY | EEE-SSEEE | bbbbaabbb |
1dii_A_426 | 1dii | A | 428 | 436 | FIVAPRDMH | EEE-SSEEE | bbxbaabbb |
1dl5_A_257 | 1dl5 | A | 259 | 267 | YYAGPNGVV | EEE-SSEEE | bxxxaabbb |
1dle_A_40 | 1dle | A | 45 | 53 | AVVSEYFVL | EE-SSSEEE | bxabaabbx |
1dmu_A_180 | 1dmu | A | 181 | 189 | TIQGPRSSQ | EEE-SS-EE | bxbbaabbb |
1dym_A_197 | 1dym | A | 201 | 209 | WEANSRASH | EEE-SS-EE | bbbbaabbb |
1dyp_A_219 | 1dyp | A | 223 | 231 | VNVTKDKIT | EEE-SSEEE | bbbbaabbb |
1edz_A_203 | 1edz | A | 205 | 213 | YSVDVNNIQ | EEE-SSEEE | xxbbaabbb |
1ejd_A_272 | 1ejd | A | 273 | 281 | IETGEDWIS | EEE-SSEEE | bbbbaabbb |
1ex4_A_236 | 1ex4 | A | 242 | 250 | LWKGEGAVV | EEE-SSEEE | abbbaabbb |
1f7l_A_95 | 1f7l | A | 103 | 111 | ITHTKEYAA | EEE-SSEEE | bbbbaabbb |
1fit_*_15 | 1fit | - | 16 | 24 | FLKTELSFA | EEE-SSEEE | abbbaabbb |
1fot_A_150 | 1fot | A | 153 | 161 | TFQDAQQIF | EEE-SSEEE | bebbaabxb |
1fth_A_1098 | 1fth | A | 1103 | 1111 | ISHTDQFVT | EEE-SSEEE | bbbbaabbb |
1g6s_A_286 | 1g6s | A | 287 | 295 | ICWGDDYIS | EEE-SSEEE | bbbbaabbb |
1g6s_A_358 | 1g6s | A | 359 | 367 | VEEGHDYIR | EEE-SSEEE | bbxxaabbb |
1g86_A_89 | 1g86 | A | 93 | 101 | ISVLPDKYQ | EEE-SSEEE | bbxxaabxb |
1gcy_A_372 | 1gcy | A | 375 | 383 | TVSGSQQTL | EEE-SS-EE | bbxxaabbb |
1gkz_A_268 | 1gkz | A | 272 | 280 | IANNDVDLI | EEE-SSEEE | bbbbaabbb |
1gzk_A_215 | 1gzk | A | 218 | 226 | AFQTHDRLC | EEE-SSEEE | bbbxaabbb |
1h1w_A_145 | 1h1w | A | 148 | 156 | TFQDDEKLY | EEE-SSEEE | bbbbaabbb |
1h26_C_66 | 1h26 | C | 69 | 77 | VIHTENKLY | EEE-SSEEE | bbbxaabbb |
1h8e_H_16 | 1h8e | H | 19 | 27 | TFASPTQVF | EEE-SS-EE | bbbbaabba |
1hdg_O_57 | 1hdg | O | 57 | 65 | VEYTENSLI | EEE-SSEEE | bbbbaabbb |
1i1q_A_292 | 1i1q | A | 295 | 303 | FMQDNDFTL | EEE-SS-EE | bbbxaabbb |
1i1q_A_383 | 1i1q | A | 390 | 398 | VDRYSYVMH | EEE-SSEEE | bbbbaabbb |
1i82_A_40 | 1i82 | A | 45 | 53 | VLWDENYLY | EEE-SSEEE | bbbbaabbb |
1ig8_A_79 | 1ig8 | A | 85 | 93 | IDLGGTNLR | EEE-SSEEE | bbxxaabxb |
1iru_J_10 | 1iru | J | 13 | 21 | AMKGKNCVA | EEE-SSEEE | bbbbaabbb |
1j0h_A_60 | 1j0h | A | 62 | 70 | TGSDELFDY | EEE-SSEEE | aebbaabbb |
1j79_A_325 | 1j79 | A | 325 | 332 | .IALTDDTL | .EE-SSSEE | .bxbaabbb |
1ji1_A_567 | 1ji1 | A | 571 | 579 | GRFDNVNRI | EEE-SS-EE | bbbbaabbb |
1ji2_A_58 | 1ji2 | A | 60 | 68 | AGSDERFDY | EEE-SSEEE | aebbaabbb |
1jks_A_79 | 1jks | A | 82 | 90 | VYENKTDVI | EEE-SSEEE | bbbbaabbb |
1jln_A_407 | 1jln | A | 414 | 422 | VTECDNYTI | EEE-SSEEE | bbxbaabbb |
1jm6_A_1265 | 1jm6 | A | 1269 | 1277 | VALGEEDLS | EEE-SSEEE | bbbbaabbb |
1jz7_A_739 | 1jz7 | A | 740 | 748 | LTTSEMDFC | EEE-SSEEE | bbbbaabbb |
1jz7_A_819 | 1jz7 | A | 827 | 835 | ADTLADAVL | EEE-SSEEE | bbbxaabbb |
1k1x_A_400 | 1k1x | A | 402 | 410 | MVENDGFIA | EEE-SSEEE | bbbbaabbb |
1k32_A_585 | 1k32 | A | 588 | 596 | IIPLESSIL | EEE-SSEEE | bbwbaabbx |
1k3x_A_89 | 1k3x | A | 92 | 100 | KLQTADKTI | EEE-SSEEE | bbbbaabbb |
1kuu_A_112 | 1kuu | A | 115 | 123 | AAINGSEAF | EEE-SS-EE | bbbbaabbb |
1l8k_A_141 | 1l8k | A | 148 | 156 | EDVKSYYTV | EEE-SSEEE | bbxxaabbb |
1lar_A_1449 | 1lar | A | 1456 | 1464 | TVELATYTV | EEE-SSEEE | bbxbaabbb |
1lar_A_1738 | 1lar | A | 1745 | 1753 | EYNMPQYIL | EEE-SSEEE | bbxbaabbb |
1lwy_A_62 | 1lwy | A | 66 | 74 | LTQTEEQLH | EEE-SSEEE | bbbbaabbx |
1mq4_A_196 | 1mq4 | A | 199 | 207 | YFHDATRVY | EEE-SSEEE | bbbbaabbb |
1mu2_A_232 | 1mu2 | A | 232 | 240 | YELWPTKWK | EEE-SSEEE | bbxxaabbb |
1mve_A_101 | 1mve | A | 103 | 111 | LEWTPNYVR | EEE-SSEEE | bbbbaabbb |
1nz0_A_25 | 1nz0 | A | 26 | 34 | SLQNEYFVV | EEE-SSEEE | bbbbaabbb |
1o6y_A_11 | 1o6y | A | 17 | 25 | LGFGGMSEV | EEE-SSEEE | abbbaabbb |
1o7d_D_606 | 1o7d | D | 606 | 614 | VIQNEYLRA | EEE-SSEEE | bbbbaabbb |
1o9l_A_468 | 1o9l | A | 468 | 476 | RIITEKAVF | EEE-SSEEE | bbbbaabbb |
1omw_A_257 | 1omw | A | 260 | 268 | AFHTPDKLS | EEE-SSEEE | bbbbaabxx |
1pfq_A_404 | 1pfq | A | 408 | 416 | EALTSDYLY | EEE-SSEEE | abbbaabbb |
1pkg_A_589 | 1pkg | A | 595 | 603 | LGAGAFGKV | EEE-SSEEE | aebbaabbb |
1psd_A_364 | 1psd | A | 370 | 378 | LQTSAQMGY | EEE-SSEEE | bbbxaabbb |
1pvd_A_305 | 1pvd | A | 307 | 315 | VEFHSDHMK | EEEETTEEE | bbxbaabbb |
1q8y_A_158 | 1q8y | A | 164 | 172 | LGWGHFSTV | EEE-SSEEE | abbbaabbb |
1qhw_A_293 | 1qhw | A | 297 | 305 | VEIGSKEMS | EEE-SSEEE | bbbbaabbb |
1ryp_A_42 | 1ryp | A | 44 | 52 | AVRGKDCTV | EEE-SSEEE | bbbxaabbb |
1ryp_F_35 | 1ryp | F | 37 | 45 | GLRSNTHAV | EEE-SSEEE | bbbbaabbb |
1ryp_G_36 | 1ryp | G | 38 | 46 | GIKCNDGVV | EEEETTEEE | bbxbaabbb |
1ryp_I_3 | 1ryp | I | 5 | 13 | GVKFNNGVV | EEEETTEEE | bbxbaabbb |
1uet_A_315 | 1uet | A | 320 | 328 | FKASEEFCY | EEE-SSEEE | bbbbaabbb |
1umw_A_511 | 1umw | A | 514 | 522 | WFRTRSAII | EEE-SSEEE | bbbbaabbb |
1uxy_*_70 | 1uxy | - | 72 | 80 | IHDEPDAWY | EEE-SSEEE | bbxbaabxb |
1yfo_A_356 | 1yfo | A | 363 | 371 | VTVLVDYTV | EEE-SSEEE | bbxbaabbb |
2bat_*_115 | 2bat | - | 122 | 130 | VSCDPVKCY | EEE-SS-EE | bbbxaabxb |
2ovw_A_197 | 2ovw | A | 201 | 209 | WEANSRATH | EEE-SS-EE | bbbbaabbb |
2shp_A_383 | 2shp | A | 390 | 398 | ESAAHDYTL | EEE-SSEEE | bbxbaabbx |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Loop | PDB | Chain | Site | Residue |
1h1w_A_145 | 1h1w | A | BC2SO4 BINDING SITE FOR CHAIN A | Y - 146 |
1h1w_A_145 | 1h1w | A | PPBPHOSPHOPEPTIDE BINDING SITE | T - 148 |
1h1w_A_145 | 1h1w | A | BC1SO4 BINDING SITE FOR CHAIN A | F - 149 |
1h1w_A_145 | 1h1w | A | PPBPHOSPHOPEPTIDE BINDING SITE | Q - 150 |
1h1w_A_145 | 1h1w | A | AC2GOL BINDING SITE FOR CHAIN A | K - 154 |
1h1w_A_145 | 1h1w | A | PIFPIF-POCKET (BIONDI ET AL., 2000) | L - 155 |
1h1w_A_145 | 1h1w | A | AC2GOL BINDING SITE FOR CHAIN A | Y - 156 |
2ovw_A_197 | 2ovw | A | CTACATALYTIC RESIDUES. | E - 197 |
2ovw_A_197 | 2ovw | A | CTACATALYTIC RESIDUES. | E - 202 |
Clusters included in this Subclass |
CLUSTER: HA.2.3 |
CLUSTER: HA.3.6 |
CLUSTER: HA.3.75 |
CLUSTER: HA.4.4 |