Information on SUBCLASS 2.2.8 |
Subclass Accession number: 7742
Subclass: 2.2.8 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 8 Average sequence ID (%) : 14.8 +/- 15.3 Average RMSD (Å) : 0.700 +/- 0.169 Consensus geometry
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Consensus Sequence: | phXpGX |
(φψ)-conformation: | pbaaeb |
Pattern: | [giktv] | x | x | [fiklt] | x | [DENPQRT] | x | x | [dehnry] | [G] | x | [CFKLV] | x | [ailtv] | [aenpt] |
Conservation: | -0.404 | -0.272 | -0.376 | -0.224 | 0.000 | 0.019 | -0.532 | -0.156 | -0.276 | 3.560 | -0.523 | -0.248 | -0.194 | 0.002 | -0.377 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1ati_A_290 | 1ati | A | 292 | 306 | VDILYRFPHGSLELE | EEEEEEETTEEEEEE | bbbbbxxaaexbxab |
1gkl_A_828 | 1gkl | A | 830 | 844 | VKETYTGINGTKSLN | EEEEEEETTEEEEEE | bxbbbbbaaexbbbb |
1m5s_A_137 | 1m5s | A | 138 | 152 | KVYKVPIMEGDFLAE | EEEEEEETTEEEEEE | xbbxbwbaaebxbbp |
1oal_A_15 | 1oal | A | 18 | 32 | TIELSQNKYGVVFIP | EEEEEEETTEEEEEE | bbxbbxbaaexbbbx |
1sfe_*_15 | 1sfe | - | 15 | 29 | RYALADCELGRCLVA | EEEEEEETTEEEEEE | bbbbbxbaaexbbbb |
1ubk_L_469 | 1ubk | L | 471 | 485 | GVGFVNAPRGGLSHW | EEEEEEETTEEEEEE | bbbbbxxaaexbbbb |
2aps_A_29 | 2aps | A | 33 | 47 | TVEITESAYGLVFTP | EEEEEEETTEEEEEE | bbbbbbbaaexbbbx |
4ubp_A_79 | 4ubp | A | 80 | 94 | IQAEATFPDGTKLVT | EEEEEEETTEEEEEE | bbbbbxxaaexbxbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
PDB Site Annotated loops in this subclass |
Clusters included in this Subclass |
CLUSTER: HA.3.37 |