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Information on SUBCLASS 2.2.39
Subclass Accession number: 7773
Subclass: 2.2.39 PSSM
Type: HA beta-beta hairpin
DB: ArchDB-EC

Image coordinates: Rasmol PDB Jmol PDB
Consensus coordinates: Rasmol PDB Jmol PDB
Number of loops: 2

Average sequence ID (%) : 11.8 +/- 0.0
Average RMSD (Å) : 0.400 +/- 0.000

Consensus geometry
d (Å): 3 delta (°): 45-90 theta (°): 135-180 rho (°): 315-360
Consensus Sequence: XXpXGX
(φψ)-conformation: bbaaeb
Pattern: [GN][ES][CV][MV]x[GT][CT][EH][NW][G][KV][F][KT][AG]x[GV]x
Conservation:0.305-0.1970.1380.138-1.033-0.5310.3050.472-0.1972.311-0.8652.311-0.364-0.030-0.865-1.033-0.865
Loops included in this Subclass
LoopPDBChainStartEndSequenceSec StructRamachandran
1cqq_A_141cqq   A1430NSCVITTENGKFTGLGVHEEEEEETTEEEEEEEEabbxxbbaaebbxxbxa
1eu1_A_61eu1   A622GEVMSGCHWGVFKARVEEEEEEEETTEEEEEEEEebbxbbbaaexbbxbbb
PDB ligands within a cut-off distance of 6 Å in this subclass
LoopPDBChainLigandsResidue
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER T - 20
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER N - 22
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER G - 23
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER K - 24
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER F - 25
1cqq_A_141cqq   A     AG74-{2-(4-FLUORO-BENZYL)-6-METHYL-5-[(5-METHYL-ISOXAZOLE -3-CARBONYL)-AMINO]-4-OXO-HEPTANOYLAMINO}-5-(2-OXO-PYRROLIDIN-3-YL)-PENTANOIC ACID ETHYL ESTER T - 26
1eu1_A_61eu1   A     GLCGLUCOSE E - 7
1eu1_A_61eu1   A     GLCGLUCOSE M - 9
1eu1_A_61eu1   A     GLCGLUCOSE K - 18

Clusters included in this Subclass
CLUSTER: HA.1.39