Information on SUBCLASS 2.3.9 |
Subclass Accession number: 7782
Subclass: 2.3.9 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 4 Average sequence ID (%) : 7.8 +/- 9.0 Average RMSD (Å) : 0.625 +/- 0.222 Consensus geometry
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Consensus Sequence: | XpGppX |
(φψ)-conformation: | bbeabb |
Pattern: | [FMV] | [IKLV] | x | x | x | [CKQR] | [GQ] | [AEST] | [ERST] | x | [FIL] | [NPQS] | [GLY] | [CGL] | [HLVW] |
Conservation: | 1.149 | 0.046 | -0.526 | -1.527 | -0.955 | -0.025 | 2.344 | 0.261 | 0.046 | -0.097 | 1.386 | 0.118 | -0.716 | -0.690 | -0.812 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1b7y_B_298 | 1b7y | B | 299 | 313 | VIAGWRGEESFPLGL | EEEEEETTEEEEEEE | bbbbbbeabbbwabx |
1eov_A_125 | 1eov | A | 127 | 141 | FLTLRQQASLIQGLV | EEEEEETTEEEEEEE | bbbxbbeabbbxbbb |
1jqp_A_75 | 1jqp | A | 81 | 95 | FKYEVKGSRAISYCH | EEEEEETTEEEEEEE | xxbbxbeabbbxbaa |
1uj1_A_17 | 1uj1 | A | 17 | 31 | MVQVTCGTTTLNGLW | EEEEEETTEEEEEEE | xbbbbbeaxbbxbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1jqp_A_75 | 1jqp | A | NAGN-ACETYL-D-GLUCOSAMINE | R - 89 |
Clusters included in this Subclass |
CLUSTER: HA.1.78 |
CLUSTER: HA.3.143 |