Information on SUBCLASS 2.3.11 |
Subclass Accession number: 7784
Subclass: 2.3.11 Type: HA beta-beta hairpin DB: ArchDB-EC Image coordinates: Consensus coordinates: |
Number of loops: 3 Average sequence ID (%) : 66.7 +/- -17.3 Average RMSD (Å) : 0.233 +/- 0.058 Consensus geometry
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Consensus Sequence: | XhGppX |
(φψ)-conformation: | bbeapb |
Pattern: | [IMV] | [V] | [QR] | [V] | [CST] | [CY] | [G] | [NT] | [NT] | [TV] | [L] | [N] | [G] | [L] | [W] | [L] |
Conservation: | -0.729 | -0.086 | -0.524 | -0.086 | -1.075 | -0.553 | 0.805 | -0.613 | -0.646 | -0.877 | -0.086 | 0.805 | 0.805 | -0.086 | 3.031 | -0.086 |
Loops included in this Subclass |
Loop | PDB | Chain | Start | End | Sequence | Sec Struct | Ramachandran |
1lvo_A_17 | 1lvo | A | 17 | 32 | IVRVSYGNNVLNGLWL | EEEEEETTEEEEEEEE | xbxbbbeaxbbbbbbb |
1p9s_A_17 | 1p9s | A | 17 | 32 | VVRVCYGNTVLNGLWL | EEEEEETTEEEEEEEE | xbxbbbeaxbbxbbbb |
1uj1_A_17 | 1uj1 | A | 17 | 32 | MVQVTCGTTTLNGLWL | EEEEEETTEEEEEEEE | xbbbbbeaxbbxbbbb |
PDB ligands within a cut-off distance of 6 Å in this subclass |
Loop | PDB | Chain | Ligands | Residue |
1p9s_A_17 | 1p9s | A | MSESELENOMETHIONINE | Y - 22 |
1p9s_A_17 | 1p9s | A | MSESELENOMETHIONINE | N - 28 |
1p9s_A_17 | 1p9s | A | MSESELENOMETHIONINE | G - 29 |
1p9s_A_17 | 1p9s | A | MSESELENOMETHIONINE | L - 30 |
1p9s_A_17 | 1p9s | A | MSESELENOMETHIONINE | W - 31 |
Clusters included in this Subclass |
CLUSTER: HA.3.83 |